YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|48425520, gi\|...
Organism:	Homo sapiens
Length:	145 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|48425520, gi|....

Description	E-value	Query Range	Subject Range
gi\|9454364 - gi\|9454364\|gb\|AAF87776.1\| tumor susceptibility protein 101 [Chelonia mydas]	143.0	[0..2]	[145..2]
gi\|50747848 - gi\|50747848\|ref\|XP_421014.1\| PREDICTED: similar to tumor susceptibility protein 101 [Gallus gallus]	142.0	[0..4]	[145..377]
gi\|60820480 - gi\|60820480\|gb\|AAX36537.1\| tumor susceptibility gene 101 [synthetic construct]	141.0	[0..2]	[145..2]
gi\|123985291, gi... - gi\|61355224\|gb\|AAX41116.1\| tumor susceptibility gene 101 [synthetic construct], gi\|60655269\|gb\|AAX32... HGNC:15971\|MIM:6... - susceptibility gene 101 gi\|12803337 - gi\|12803337\|gb\|AAH02487.1\| Tumor susceptibility gene 101 [Homo sapiens]	141.0	[0..2]	[145..2]
gi\|73988688 - gi\|73988688\|ref\|XP_865453.1\| PREDICTED: similar to tumor susceptibility gene 101 isoform 5 [Canis fa...	140.0	[0..2]	[145..2]
gi\|55727729 - gi\|55727729\|emb\|CAH90615.1\| hypothetical protein [Pongo abelii] gi\|197101787 - gi\|197101787\|ref\|NP_001125333.1\| tumor susceptibility gene 101 [Pongo abelii]	140.0	[0..2]	[145..2]
gi\|114636478 - gi\|114636478\|ref\|XP_508319.2\| PREDICTED: tumor susceptibility gene 101 isoform 2 [Pan troglodytes]	139.0	[0..2]	[145..2]

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Predicted Domain #1

Region A:
Residues: [1-145]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 XAVSESQLKK XVSKYKYRDL TVRETVNVIT LYKDLKPVLD SYVFNDGSSR ELXNLTGTIP  60
   61 VPYRGNTYNI PICLWLLDTY PYNPPICFVK PTSSXTIKTG KHVDANGKIY LPYLHEWKHP 120
  121 QSDLLGLIQV XIVVFGDEPP VFSRP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.39794
Match:	2f0rA
Description:	No description for 2f0rA was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.36134415541475	bayes_pls_golite062009
ligase activity	0.0718869348666398	bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds	0.0371971638467299	bayes_pls_golite062009
acid-amino acid ligase activity	0.0334819228148397	bayes_pls_golite062009
small conjugating protein ligase activity	0.0318206634586797	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: