YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|214001645
Organism:	Salmonella enterica subsp. enterica serovar Typhi str. E98-3139
Length:	161 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|214001645.

Description	E-value	Query Range	Subject Range
gi\|146273747, gi... - gi\|98662370\|dbj\|GAA00697.1\| unnamed protein product [Pelotomaculum thermopropionicum SI], gi\|1476776...	9.0E-33	[2..157]	[4..204]
gi\|168229763, gi... - gi\|205335949\|gb\|EDZ22713.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s... gi\|197289715, gi... - gi\|197289715\|gb\|EDY29078.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s... gi\|167549605, gi... - gi\|205325374\|gb\|EDZ13213.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s... gi\|205328826, gi... - gi\|205328826\|gb\|EDZ15590.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s... gi\|16420931, gi\|... - gi\|16765714\|ref\|NP_461329.1\| phosphohistidine phosphatase [Salmonella typhimurium LT2], gi\|16420931\|... gi\|238912334 - gi\|238912334\|ref\|ZP_04656171.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica se... gi\|224467651, gi... - gi\|224583124\|ref\|YP_002636922.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica s... gi\|62180959, gi\|... - gi\|62180959\|ref\|YP_217376.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica serov... gi\|199604466, gi... - gi\|200387368\|ref\|ZP_03213980.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enteri... gi\|206709608, gi... - gi\|207857805\|ref\|YP_002244456.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica s... gi\|197262936, gi... - gi\|197262936\|ref\|ZP_03163010.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enteri... gi\|198243164, gi... - gi\|198243164\|ref\|YP_002216459.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enter... gi\|194472111, gi... - gi\|194472111\|ref\|ZP_03078095.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enteri... lcl\|NC_016856.1_... - [gene=sixA] [protein=phosphohistidine phosphatase] [protein_id=YP_005238471.1] [location=complement(... gi\|194711784, gi... - gi\|194736282\|ref\|YP_002115456.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enter... gi\|194401646, gi... - gi\|194442983\|ref\|YP_002041651.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enter... gi\|194407427, gi... - gi\|194449123\|ref\|YP_002046442.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica s... gi\|168242514, gi... - gi\|205338524\|gb\|EDZ25288.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s... gi\|168465899, gi... - gi\|195631473\|gb\|EDX50033.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s...	1.0E-32	[1..161]	[1..161]
gi\|197093126, gi... - gi\|197361650\|ref\|YP_002141286.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica s... gi\|56126973, gi\|... - gi\|56412716\|ref\|YP_149791.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica serov...	1.0E-32	[1..161]	[1..161]
EG14126 - phosphohistidine phosphatase / Phosphohistidine phosphatase affecting ArcB H-D phosphorelay; targets... gi\|124526503, gi... - gi\|124526503\|ref\|ZP_01698456.1\| phosphohistidine phosphatase, SixA [Escherichia coli B], gi\|12450197... SIXA_ECOLI - Phosphohistidine phosphatase sixA (EC 3.1.3.-) (RX6) - Escherichia coli gi\|89109160, gi\|... - gi\|89109160\|ref\|AP_002940.1\| phosphohistidine phosphatase [Escherichia coli str. K-12 substr. W3110]... gi\|81246232, gi\|... - gi\|82544821\|ref\|YP_408768.1\| phosphohistidine phosphatase [Shigella boydii Sb227], gi\|81246232\|gb\|AB... gi\|73856332, gi\|... - gi\|74312855\|ref\|YP_311274.1\| phosphohistidine phosphatase [Shigella sonnei Ss046], gi\|73856332\|gb\|AA... gi\|194432929, gi... - gi\|83570050\|ref\|ZP_00921497.1\| COG2062: Phosphohistidine phosphatase SixA [Shigella dysenteriae 1012... EG14126 - phosphohistidine phosphatase / Phosphohistidine phosphatase affecting ArcB H-D phosphorelay; targets... gi\|238901513, gi... - gi\|238901513\|ref\|YP_002927309.1\| phosphohistidine phosphatase [Escherichia coli BW2952], gi\|23886204... gi\|251785700, gi... - gi\|251785700\|ref\|YP_003000004.1\| hypothetical protein B21_02225 [Escherichia coli BL21], gi\|24237797... gi\|253323781, gi... - gi\|254289109\|ref\|YP_003054857.1\| phosphohistidine phosphatase [Escherichia coli BL21(DE3)], gi\|25397... gi\|253974249, gi... - gi\|254162348\|ref\|YP_003045456.1\| phosphohistidine phosphatase [Escherichia coli B str. REL606], gi\|2... gi\|170081956, gi... - gi\|170081956\|ref\|YP_001731276.1\| phosphohistidine phosphatase [Escherichia coli str. K-12 substr. DH... gi\|170019352, gi... - gi\|170019352\|ref\|YP_001724306.1\| phosphohistidine phosphatase [Escherichia coli ATCC 8739], gi\|16975... gi\|157067508, gi... - gi\|157161828\|ref\|YP_001459146.1\| phosphohistidine phosphatase [Escherichia coli HS], gi\|157067508\|gb... gi\|157155292, gi... - gi\|157155292\|ref\|YP_001463686.1\| phosphohistidine phosphatase [Escherichia coli E24377A], gi\|1570773... gi\|218695939, gi... - gi\|218695939\|ref\|YP_002403606.1\| phosphohistidine phosphatase [Escherichia coli 55989], gi\|218352671... gi\|218361663, gi... - gi\|218554895\|ref\|YP_002387808.1\| phosphohistidine phosphatase [Escherichia coli IAI1], gi\|218361663\|... gi\|218432966, gi... - gi\|218705869\|ref\|YP_002413388.1\| phosphohistidine phosphatase [Escherichia coli UMN026], gi\|21843296... gi\|188495821, gi... - gi\|188495821\|ref\|ZP_03003091.1\| phosphohistidine phosphatase SixA [Escherichia coli 53638], gi\|18849... gi\|187428414, gi... - gi\|187731422\|ref\|YP_001881162.1\| phosphohistidine phosphatase SixA [Shigella boydii CDC 3083-94], gi... gi\|193062305, gi... - gi\|193062305\|ref\|ZP_03043400.1\| phosphohistidine phosphatase SixA [Escherichia coli E22], gi\|1929319... gi\|191165575, gi... - gi\|191165575\|ref\|ZP_03027416.1\| phosphohistidine phosphatase SixA [Escherichia coli B7A], gi\|1909044... gi\|194428617, gi... - gi\|194428617\|ref\|ZP_03061155.1\| phosphohistidine phosphatase SixA [Escherichia coli B171], gi\|194413... gi\|193069767, gi... - gi\|193069767\|ref\|ZP_03050718.1\| phosphohistidine phosphatase SixA [Escherichia coli E110019], gi\|192... gi\|209919840, gi... - gi\|209919840\|ref\|YP_002293924.1\| phosphohistidine phosphatase [Escherichia coli SE11], gi\|209913099\|... gi\|194425097, gi... - gi\|194436369\|ref\|ZP_03068471.1\| phosphohistidine phosphatase SixA [Escherichia coli 101-1], gi\|19442...	3.0E-31	[1..161]	[1..161]
gi\|82777752, gi\|... - gi\|82777752\|ref\|YP_404101.1\| phosphohistidine phosphatase [Shigella dysenteriae Sd197], gi\|81241900\|...	3.0E-31	[1..161]	[1..161]
gi\|217319105, gi... - gi\|217326738\|ref\|ZP_03442821.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. TW1... gi\|209160621, gi... - gi\|209399221\|ref\|YP_002271751.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC... gi\|254593632, gi... - gi\|254794232\|ref\|YP_003079069.1\| phosphohistidine phosphatase [Escherichia coli O157:H7 str. TW14359... gi\|13362693, gi\|... - gi\|15832477\|ref\|NP_311250.1\| hypothetical protein ECs3223 [Escherichia coli O157:H7], gi\|13362693\|db... gi\|13362693, gi\|... - gi\|15832477\|ref\|NP_311250.1\| phosphohistidine phosphatase [Escherichia coli O157:H7 str. Sakai], gi\|... gi\|189378895, gi... - gi\|189378895\|gb\|EDU97311.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC508],... gi\|25323598, gi\|... - pir\|\|H85875 hypothetical protein Z3603 [imported] - Escherichia coli (strain O157:H7, substrain EDL... gi\|168787253, gi... - gi\|189372812\|gb\|EDU91228.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC869],... gi\|168780205, gi... - gi\|189001982\|gb\|EDU70968.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4076]... gi\|15802886, gi\|... - gi\|15802886\|ref\|NP_288913.1\| phosphohistidine phosphatase [Escherichia coli O157:H7 EDL933], gi\|1251... gi\|187771163, gi... - gi\|187771163\|gb\|EDU35007.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4196]... gi\|208821380, gi... - gi\|208821380\|ref\|ZP_03261700.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4... gi\|208812458, gi... - gi\|208812458\|ref\|ZP_03253787.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4... gi\|208725472, gi... - gi\|208805671\|ref\|ZP_03248008.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4... gi\|195935721 - gi\|195935721\|ref\|ZP_03081103.1\| phosphohistidine phosphatase [Escherichia coli O157:H7 str. EC4024] gi\|189362926, gi... - gi\|189362926\|gb\|EDU81345.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4486]... gi\|168761216, gi... - gi\|189368280\|gb\|EDU86696.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4501]... gi\|189357667, gi... - gi\|189357667\|gb\|EDU76086.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4401]... gi\|188017351, gi... - gi\|188017351\|gb\|EDU55473.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4113]...	4.0E-31	[1..161]	[1..161]
gi\|110344135, gi... - gi\|110642543\|ref\|YP_670273.1\| phosphohistidine phosphatase [Escherichia coli 536], gi\|110344135\|gb\|A... gi\|47600724 - gi\|47600724\|emb\|CAE55845.1\| phosphohistidine phosphatase SixA [Escherichia coli Nissle 1917] gi\|91211636, gi\|... - gi\|91211636\|ref\|YP_541622.1\| phosphohistidine phosphatase [Escherichia coli UTI89], gi\|91073210\|gb\|A... gi\|227835749, gi... - gi\|227887399\|ref\|ZP_04005204.1\| phosphohistidine phosphatase [Escherichia coli 83972], gi\|227835749\|... gi\|218559252, gi... - gi\|218559252\|ref\|YP_002392165.1\| phosphohistidine phosphatase [Escherichia coli S88], gi\|218366021\|e... gi\|218428063, gi... - gi\|218690499\|ref\|YP_002398711.1\| phosphohistidine phosphatase [Escherichia coli ED1a], gi\|218428063\|... gi\|117624528, gi... - gi\|117624528\|ref\|YP_853441.1\| phosphohistidine phosphatase [Escherichia coli APEC O1], gi\|115513652\|... gi\|237704819, gi... - gi\|237704819\|ref\|ZP_04535300.1\| phosphohistidine phosphatase sixA [Escherichia sp. 3_2_53FAA], gi\|22... gi\|26109133, gi\|... - gi\|26248727\|ref\|NP_754767.1\| phosphohistidine phosphatase [Escherichia coli CFT073], gi\|26109133\|gb\|... gi\|191173774, gi... - gi\|191173774\|ref\|ZP_03035296.1\| phosphohistidine phosphatase SixA [Escherichia coli F11], gi\|1909059... gi\|47600724 - gi\|47600724\|emb\|CAE55845.1\| phosphohistidine phosphatase SixA [Escherichia coli Nissle 1917] gi\|215265624, gi... - gi\|215487552\|ref\|YP_002329983.1\| phosphohistidine phosphatase [Escherichia coli O127:H6 str. E2348/6...	6.0E-31	[1..161]	[1..161]
gi\|24052783, gi\|... - gi\|24113712\|ref\|NP_708222.1\| phosphohistidine phosphatase [Shigella flexneri 2a str. 301], gi\|240527... gi\|110615851, gi... - gi\|110806303\|ref\|YP_689823.1\| phosphohistidine phosphatase [Shigella flexneri 5 str. 8401], gi\|11061... gi\|30042016, gi\|... - gi\|30063761\|ref\|NP_837932.1\| phosphohistidine phosphatase [Shigella flexneri 2a str. 2457T], gi\|3004...	9.0E-31	[1..161]	[1..161]
gi\|20807793, gi\|... - gi\|20807793\|ref\|NP_622964.1\| phosphoglycerate mutase/fructose-2,6-bisphosphatase [Thermoanaerobacter... gi\|20807793 - gi\|20807793\|ref\|NP_622964.1\| Phosphoglycerate mutase/fructose-2,6-bisphosphatase [Thermoanaerobacter...	4.0E-29	[2..159]	[4..206]
gi\|75515704 - gi\|75515704\|ref\|ZP_00737839.1\| COG2062: Phosphohistidine phosphatase SixA [Escherichia coli 53638] gi\|75259798 - gi\|75259798\|ref\|ZP_00731100.1\| COG2062: Phosphohistidine phosphatase SixA [Escherichia coli E22] gi\|75235544 - gi\|75235544\|ref\|ZP_00719735.1\| COG2062: Phosphohistidine phosphatase SixA [Escherichia coli E110019] gi\|75231395 - gi\|75231395\|ref\|ZP_00717783.1\| COG2062: Phosphohistidine phosphatase SixA [Escherichia coli B7A] gi\|75210146 - gi\|75210146\|ref\|ZP_00710318.1\| COG2062: Phosphohistidine phosphatase SixA [Escherichia coli B171] gi\|75196382 - gi\|75196382\|ref\|ZP_00706452.1\| COG2062: Phosphohistidine phosphatase SixA [Escherichia coli HS] gi\|75187121 - gi\|75187121\|ref\|ZP_00700388.1\| COG2062: Phosphohistidine phosphatase SixA [Escherichia coli E24377A] gi\|75177867 - gi\|75177867\|ref\|ZP_00697929.1\| COG2062: Phosphohistidine phosphatase SixA [Shigella boydii BS512] gi\|83588361 - gi\|83588361\|ref\|ZP_00926986.1\| COG2062: Phosphohistidine phosphatase SixA [Escherichia coli 101-1]	6.0E-29	[6..161]	[1..156]

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Predicted Domain #1

Region A:
Residues: [1-161]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVFIMRHGD AALDAASDSV RPLTSCGCDE SRLMANWLKG QKVDIERVLV SPFLRAEQTL  60
   61 DVVGDCMNLP TQVDVLPELT PCGDVGLVSA YLQALANEEI GSVLVISHLP LVGYLVSELC 120
  121 PGETPPMFTT SAIANVTLDE SGKGTFNWQM SPCNLKMAKA I

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.522879
Match:	1ujbA
Description:	Structure of the protein histidine phosphatase SixA
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits