YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|190409462
Organism:	Saccharomyces cerevisiae RM11-1a
Length:	224 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190409462.

Description	E-value	Query Range	Subject Range
IRC18_YEAST - Outer spore wall protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRC18 PE=2 SV... gi\|151945048 - gi\|151945048\|gb\|EDN63299.1\| conserved protein [Saccharomyces cerevisiae YJM789] gi\|190409462 - gi\|190409462\|gb\|EDV12727.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] IRC18 - Putative protein of unknown function; expression induced in respiratory-deficient cells and in carbo...	5.0E-97	[1..224]	[1..224]

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Predicted Domain #1

Region A:
Residues: [1-224]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVQMIERIF LIQLCLLTVV LASSRAVVEF ESTGTKLVNS LRVLAAYSQS SVCVDEKISG  60
   61 IERQIEEVKD MYGNHSFILK GLNGILNNKV NMLTREIQME TVGNNTFETE TGKLTKGLNR 120
  121 AVNISPFKYI KKFKTVSTKK FESLLNKYDL VAKKGGELTE EQKKKKEVLS RISRVVAATT 180
  181 IEAGLAQGVV DLCITVTTSL CLVSASIGGV GFLIWLTIIY QALT

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Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits