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View Structure Prediction Details

Protein: gi|221319444
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 345 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221319444.

Description E-value Query
Range
Subject
Range
GPDA_BACCN - Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 ...
287.0 [0..1] [338..1]

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Predicted Domain #1
Region A:
Residues: [1-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVTMLGAG SWGTALALVL TDNGNEVCVW AHRADLIHQI NELHENKDYL PNVKLSTSIK  60
   61 GTTDMKEAVS DADVIIVAVP TKAIREVLRQ AVPFITKKAV FVHVSKGIEP DSLLRISEIM 120
  121 EIELPSDVRK DIVVLSGPSH AEEVGLRHPT TVTASSKSMR AAEEVQDLFI NHNFRVYTNP 180
  181 DIIGVEIGGA LKNIIALAAG ITDGLGYGDN AKAALITRGL AEIARLGTKM GGNPLTFSGL 240
  241 TGVGDLIVTC TSVHSRNWRA GNLLGKGYKL EDVLEEMGMV VEGVRTTKAA YQLSKKYDVK 300
  301 MPITEALHQV LFNGQKVETA VESLMARGKT HEMEDLVNTF ENQVK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.39794
Match: 1z82A
Description: Crystal structure of glycerol-3-phosphate dehydrogenase (TM0378) from THERMOTOGA MARITIMA at 2.00 A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle