| Protein: | gi|168279069 |
| Organism: | synthetic construct |
| Length: | 376 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|168279069.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-58 | [1..376] | [32..407] |
|
|
8.0E-53 | [1..376] | [1..375] |
|
|
2.0E-52 | [1..376] | [1..376] |
|
|
2.0E-49 | [1..376] | [1..374] |
|
|
2.0E-48 | [1..376] | [1..371] |
|
|
1.0E-44 | [1..376] | [1..395] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MADYWKSQPK KFCDYCKCWI ADNRPSVEFH ERGKNHKENV AKRISEIKQK SLDKAKEEEK 60
61 ASKEFAAMEA AALKAYQEDL KRLGLESEIL EPSITPVTST IPPTSTSNQQ KEK
|
| Detection Method: |  |
| Confidence: | 8.0 |
| Match: | 1uw2A |
| Description: | The structure of the zinc finger from the human spliceosomal protein U1C |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [114-223] |
1 11 21 31 41 51
| | | | | |
1 KEKKKRKKDP SKGRWVEGIT SEGYHYYYDL ISGASQWEKP EGFQGDLKKT AVKTVWVEGL 60
61 SEDGFTYYYN TETGESRWEK PDDFIPHTSD LPSSKVNENS LGTLDESKSS
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 1o6wA |
| Description: | Splicing factor prp40 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [224-293] |
1 11 21 31 41 51
| | | | | |
1 DSHSDSDGEQ EAEEGGVSTE TEKPKIKFKE KNKNSDGGSD PETQKEKSIQ KQNSLGSNEE 60
61 KSKTLKKSNP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [294-376] |
1 11 21 31 41 51
| | | | | |
1 YGEWQEIKQE VESHEEVDLE LPSTENEYVS TSEADGGGEP KVVFKEKTVT SLGVMADGVA 60
61 PVFKKRRTEN GKSRNLRQRG DDQ
|
| Detection Method: | |
| Confidence: | 5.045757 |
| Match: | 1uzcA |
| Description: | THE STRUCTURE OF AN FF DOMAIN FROM HUMAN HYPA/FBP11 |
Matching Structure (courtesy of the PDB): |
|
