| Protein: | gi|190408954 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 393 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190408954.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..393] | [1..393] |
|
|
0.0 | [12..374] | [5..367] |
|
|
0.0 | [30..375] | [2..330] |
|
|
0.0 | [19..378] | [22..362] |
|
Region A: Residues: [1-393] |
1 11 21 31 41 51
| | | | | |
1 MGLILRWKEK KQLSSKQNAQ KSRKPANTSF RQQRLKAWQP ILSPQSVLPL LILMACVFAP 60
61 IGIGLVVSTI SVQRLVVNYT ECDALAPAKH FETIPSEYVD YHFSKKVAVQ PQWMVLTDPE 120
121 LGNQTCRIQF EVPNHIKKST YVYYRLTNFN QNYREYVQSL DLDQLKGKAL IGNDLDPNCD 180
181 PLRTVENKTI FPCGLIANSM FNDTFGTTLT GVNDTADYLL TTKGIAWDTD SHRYGKTEYN 240
241 ASDIVPPPNW AKLFPNGYTD DNIPDLQNWE QFKIWMRTAA LPNFYKLAMK NETNGLGKGI 300
301 YIADIELNYP VRSFYGTKSF VLTTNSIIGA GNEALGIVYL IVAGIATLFA ILFLIKVIFK 360
361 PRPMHDHSYL NFENSDTPFD ESSVVSIPLR EIL
|
| Detection Method: |  |
| Confidence: | 197.244125 |
| Match: | PF03381 |
| Description: | LEM3 (ligand-effect modulator 3) family / CDC50 family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [215-393] |
1 11 21 31 41 51
| | | | | |
1 TADYLLTTKG IAWDTDSHRY GKTEYNASDI VPPPNWAKLF PNGYTDDNIP DLQNWEQFKI 60
61 WMRTAALPNF YKLAMKNETN GLGKGIYIAD IELNYPVRSF YGTKSFVLTT NSIIGAGNEA 120
121 LGIVYLIVAG IATLFAILFL IKVIFKPRPM HDHSYLNFEN SDTPFDESSV VSIPLREIL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
