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View Structure Prediction Details

Protein: gi|190406439
Organism: Saccharomyces cerevisiae RM11-1a
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190406439.

Description E-value Query
Range		 Subject
Range
gi|190406439 - gi|190406439|gb|EDV09706.1| 60S ribosomal protein L32, mitochondrial precursor [Saccharomyces cerevi...
RM32_YEAST - 54S ribosomal protein L32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
MRPL32 - Mitochondrial ribosomal protein of the large subunit
 7.0E-72 [1..183] [1..183]
MRPL32 - mitochondrial ribosomal protein L32
 2.0E-53 [16..179] [31..182]
RM32_MOUSE - 39S ribosomal protein L32, mitochondrial OS=Mus musculus GN=Mrpl32 PE=1 SV=1
 6.0E-44 [23..179] [37..181]
gi|13235613 - gi|13235613|emb|CAC33586.1| hypothetical protein [Pichia pastoris]
 3.0E-40 [44..180] [6..139]
mRpL32-PA - The gene mitochondrial ribosomal protein L32 is referred to in FlyBase by the symbol Dmel\mRpL32 (CG...
 4.0E-39 [52..180] [36..169]
CE00100 - status:Confirmed UniProt:Q04907 protein_id:AAA27965.1
 7.0E-32 [59..179] [40..158]
gi|16944545, gi|... - gi|32404322|ref|XP_322774.1| hypothetical protein ( (AL442043) related to ribosomal protein YmL32 pr...
gi|85076046 - gi|85076046|ref|XP_955872.1| hypothetical protein NCU03516 [Neurospora crassa OR74A]
 2.0E-17 [59..125] [49..115]
RM32_SCHPO - Probable 54S ribosomal protein L32, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...
mrpl32 - mitochondrial ribosomal protein subunit L32
 8.0E-17 [67..129] [43..102]

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Predicted Domain #1
Region A:
Residues: [1-71] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLIFGKQL AFHKIVPTTA IGWLVPLGNP SLQIPGQKQL GSIHRWLREK LQQDHKDTED  60
   61 KDFFSNNGIL L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 9.67761199764219 bayes_pls_golite062009
structural molecule activity 9.13063837111868 bayes_pls_golite062009
binding 1.23804226457865 bayes_pls_golite062009
protein binding 0.548750465345817 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [72-183] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVPKKKVSHQ KKRQKLYGPG KKQLKMIHHL NKCPSCGHYK RANTLCMYCV GQISHIWKTH  60
   61 TAKEEIKPRQ EEELSELDQR VLYPGRRDTK YTKDLKDKDN YLERRVRTLK KD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 2.30103
Match: 1jzxM_
Description: 50S subunit
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle