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View Structure Prediction Details

Protein: gi|193069821, gi...
Organism: Escherichia coli E110019
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|193069821, gi....

Description E-value Query
Range
Subject
Range
gi|114538925, gi... - gi|114706079|ref|ZP_01438982.1| methionine sulfoxide reductase A [Fulvimarina pelagi HTCC2506], gi|1...
331.0 [0..1] [212..4]
gi|91075350, gi|... - gi|91213776|ref|YP_543762.1| methionine sulfoxide reductase A [Escherichia coli UTI89], gi|91075350|...
gi|226901808, gi... - gi|237703896|ref|ZP_04534377.1| methionine sulfoxide reductase A [Escherichia sp. 3_2_53FAA], gi|226...
gi|254037239, gi... - gi|254037239|ref|ZP_04871316.1| methionine sulfoxide reductase A [Escherichia sp. 1_1_43], gi|226840...
329.0 [0..1] [212..23]
gi|115515693, gi... - gi|117626569|ref|YP_859892.1| methionine sulfoxide reductase A [Escherichia coli APEC O1], gi|115515...
328.0 [0..1] [212..10]
gi|186684368, gi... - gi|23126307|ref|ZP_00108208.1| COG0225: Peptide methionine sulfoxide reductase [Nostoc punctiforme P...
327.0 [0..1] [209..1]
gi|83586748 - gi|83586748|ref|ZP_00925380.1| COG0225: Peptide methionine sulfoxide reductase [Escherichia coli 101...
gi|83569410 - gi|83569410|ref|ZP_00920864.1| COG0225: Peptide methionine sulfoxide reductase [Shigella dysenteriae...
gi|75515460 - gi|75515460|ref|ZP_00737617.1| COG0225: Peptide methionine sulfoxide reductase [Escherichia coli 536...
gi|75258323 - gi|75258323|ref|ZP_00729754.1| COG0225: Peptide methionine sulfoxide reductase [Escherichia coli E22...
gi|75235470 - gi|75235470|ref|ZP_00719678.1| COG0225: Peptide methionine sulfoxide reductase [Escherichia coli E11...
gi|75229594 - gi|75229594|ref|ZP_00716133.1| COG0225: Peptide methionine sulfoxide reductase [Escherichia coli B7A...
gi|75212224 - gi|75212224|ref|ZP_00712264.1| COG0225: Peptide methionine sulfoxide reductase [Escherichia coli B17...
gi|75198072 - gi|75198072|ref|ZP_00708142.1| COG0225: Peptide methionine sulfoxide reductase [Escherichia coli HS]
gi|75188934 - gi|75188934|ref|ZP_00702201.1| COG0225: Peptide methionine sulfoxide reductase [Escherichia coli E24...
327.0 [0..1] [212..10]
gi|75242389 - gi|75242389|ref|ZP_00726151.1| COG0225: Peptide methionine sulfoxide reductase [Escherichia coli F11...
327.0 [0..1] [212..10]
gi|75179323 - gi|75179323|ref|ZP_00699327.1| COG0225: Peptide methionine sulfoxide reductase [Shigella boydii BS51...
326.0 [0..1] [212..10]
gi|191170841, gi... - gi|191170841|ref|ZP_03032393.1| methionine-S-sulfoxide reductase [Escherichia coli F11], gi|19090906...
MSRA_ECOL5 - Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ms...
326.0 [0..1] [212..1]
gi|50745232 - gi|50745232|ref|XP_420035.1| PREDICTED: similar to peptide methionine sulfoxide reductase [Gallus ga...
326.0 [0..7] [209..23]
gi|22294607, gi|... - gi|22298428|ref|NP_681675.1| methionine sulfoxide reductase A [Thermosynechococcus elongatus BP-1], ...
325.0 [0..1] [208..1]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFDKKHLV SPADALPGRN TPMPVATLHA VNGHSMTNVP DGMEIAIFAM GCFWGVERLF  60
   61 WQLPGVYSTA AGYTGGYTPN PTYREVCSGD TGHAEAVRIV YDPSVISYEQ LLQVFWENHD 120
  121 PAQGMRQGND HGTQYRSAIY PLTPEQDAAA RASLERFQAA MLAADDDRHI TTEIANATPF 180
  181 YYAEDDHQQY LHKNPYGYCG IGGIGVCLPP EA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.522879
Match: 2gt3A
Description: No description for 2gt3A was found.

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor 7.33214277590189 bayes_pls_golite062009
peptide-methionine-(S)-S-oxide reductase activity 7.05871760837663 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 4.45221508174489 bayes_pls_golite062009
catalytic activity 2.02168745464921 bayes_pls_golite062009
binding 1.21670366786992 bayes_pls_golite062009
protein binding 0.0950083680136139 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle