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View Structure Prediction Details

Protein: gi|221313204
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 192 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221313204.

Description E-value Query
Range
Subject
Range
gi|2226262 - gi|2226262|emb|CAA74548.1| competence transcription factor [Bacillus subtilis]
gi|2226262|emb|C... - competence transcription factor [Bacillus subtilis]
260.0 [0..1] [192..11]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKTDAPLE SYEVNGATIA VLPEEIDGKI CSKIIEKDCV FYVNMKPLQI VDRSCRFFGS  60
   61 SYAGRKAGTY EVTKISHKPP IMVDPSNQIF LFPTLSSTRP QCGWISHVHV KEFKATEFDD 120
  121 TEVTFSNGKT MELPISYNSF ENQVYRTAWL RTKFQDRIDH RVPKRQEFML YPKEERTKMI 180
  181 YDFILRELGE RY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.62
Match: 2fn6A
Description: Helicobacter pylori PseC, aminotransferase involved in the biosynthesis of pseudoaminic acid
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.58055449353684 bayes_pls_golite062009
transferase activity 0.092500734618236 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle