| Protein: | gi|220947724 |
| Organism: | synthetic construct |
| Length: | 271 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220947724.
| Description | E-value | Query Range |
Subject Range |
|
|
438.0 | [0..21] | [271..128] |
|
|
433.0 | [0..7] | [271..19] |
|
|
418.0 | [0..6] | [271..1] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MVVKKPRPKK KPVTKKVAPA PLAVKKPVVK KVVNQLFEKR PKNFGIGQNV QPKRDLSRFV 60
61 RWPKYIRVQR QKAVLQKRLK VPPPIHQFSQ TLDKTTAVKL FKLLE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [106-271] |
1 11 21 31 41 51
| | | | | |
1 KYRPESPLAK KLRLKKIAEA KAKGKDVEPK KKPSYVSAGT NTVTKLIEQK KAQLVVIAHD 60
61 VDPLELVLFL PALCRKMGVP YCIVKGKARL GRLVRRKTCT TLALTTVDNN DKANFGKVLE 120
121 AVKTNFNERH EEIRRHWGGG ILGSKSLARI SKLERAKARE LAQKQG
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1s1iG |
| Description: | Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H. |
Matching Structure (courtesy of the PDB): |
|
