YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|221317224
Organism:	Bacillus subtilis subsp. subtilis str. JH642
Length:	198 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221317224.

Description	E-value	Query Range	Subject Range
gi\|29893958, gi\|... - gi\|30018418\|ref\|NP_830049.1\| KINB signaling pathway activation protein [Bacillus cereus ATCC 14579],... gi\|228956590, gi... - gi\|228956590\|ref\|ZP_04118386.1\| KinB-signaling pathway activation protein [Bacillus thuringiensis se... gi\|228634974, gi... - gi\|229148558\|ref\|ZP_04276814.1\| KinB-signaling pathway activation protein [Bacillus cereus m1550], g... gi\|228657858, gi... - gi\|229125666\|ref\|ZP_04254698.1\| KinB-signaling pathway activation protein [Bacillus cereus BDRD-Cer4... gi\|229107835, gi... - gi\|229107835\|ref\|ZP_04237471.1\| KinB-signaling pathway activation protein [Bacillus cereus Rock1-15]...	261.0	[0..1]	[198..1]

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Predicted Domain #1

Region A:
Residues: [1-198]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRGLVRFF FSILAVGALI TSIVGFALKW GEYRGLFLTF EAGQIFSVLF WFIGVGMIFS  60
   61 VISQMGFFVF LTVHRFALEI LRSSSLWNLL QLFFILFVAF DLMYVRFLFF GESGESLAGY 120
  121 AWLPVFLLIF GVITAYIKQK QSSKKTFVSS LFLMVVITAL EWFPALRVND EDWLYLMLFP 180
  181 LMACNAFQLL MLPKFAAK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits