YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|214001835
Organism:	Salmonella enterica subsp. enterica serovar Typhi str. E98-3139
Length:	598 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|214001835.

Description	E-value	Query Range	Subject Range
gi\|56129389, gi\|... - gi\|56415132\|ref\|YP_152207.1\| arylsulfate sulfotransferase [Salmonella enterica subsp. enterica serov... gi\|197095538, gi... - gi\|197364061\|ref\|YP_002143698.1\| probable arylsulfate sulfotransferase [Salmonella enterica subsp. e...	0.0	[1..598]	[1..598]
gi\|62181706, gi\|... - gi\|62181706\|ref\|YP_218123.1\| putative arylsulfate sulfotransferase [Salmonella enterica subsp. enter... gi\|224469521, gi... - gi\|224584993\|ref\|YP_002638792.1\| probable arylsulfate sulfotransferase [Salmonella enterica subsp. e...	0.0	[1..598]	[1..598]
gi\|27448006\|gb\|A... - arylsulfate sulfotransferase ASST [Salmonella typhimurium] gi\|27448006 - gi\|27448006\|gb\|AAO13757.1\|AF295574_1 arylsulfate sulfotransferase ASST [Salmonella typhimurium]	0.0	[1..598]	[1..598]
gi\|15777486 - gi\|15777486\|gb\|AAK31641.1\| arylsulfate sulfotransferase [Citrobacter freundii] gi\|237729967, gi... - gi\|237729967\|ref\|ZP_04560448.1\| conserved hypothetical protein [Citrobacter sp. 30_2], gi\|226908573\|...	0.0	[1..598]	[1..598]
gi\|1894815 - gi\|1894815\|gb\|AAB49808.1\| Klebsiella sp. arylsulfate sulfotransferase gi\|115514476, gi... - gi\|117625352\|ref\|YP_854851.1\| arylsulfate sulfotransferase [Escherichia coli APEC O1], gi\|115514476\|... gi\|218428905, gi... - gi\|218691341\|ref\|YP_002399553.1\| arylsulfate sulfotransferase [Escherichia coli ED1a], gi\|218428905\|... gi\|91212465, gi\|... - gi\|91212465\|ref\|YP_542451.1\| arylsulfate sulfotransferase [Escherichia coli UTI89], gi\|91074039\|gb\|A... gi\|218366892, gi... - gi\|218560123\|ref\|YP_002393036.1\| arylsulfate sulfotransferase [Escherichia coli S88], gi\|218366892\|e... gi\|237706203, gi... - gi\|237706203\|ref\|ZP_04536684.1\| arylsulfate sulfotransferase [Escherichia sp. 3_2_53FAA], gi\|2268992... gi\|227887757, gi... - gi\|227887757\|ref\|ZP_04005562.1\| arylsulfate sulfotransferase [Escherichia coli 83972], gi\|227835153\|...	0.0	[1..598]	[1..598]
gi\|110643284, gi... - gi\|110643284\|ref\|YP_671014.1\| arylsulfate sulfotransferase [Escherichia coli 536], gi\|110344876\|gb\|A... gi\|170517753, gi... - gi\|170680035\|ref\|YP_001745312.1\| arylsulfate sulfotransferase [Escherichia coli SMS-3-5], gi\|1705177...	0.0	[1..598]	[1..598]
ASST_ECOL6 - Arylsulfate sulfotransferase AssT OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=...	0.0	[1..598]	[1..598]
gi\|5281108 - gi\|5281108\|gb\|AAD41460.1\|AF012826_1 arylsulfate sulfotransferase [Enterobacter amnigenus]	0.0	[1..598]	[1..598]
gi\|75240495 - gi\|75240495\|ref\|ZP_00724423.1\| hypothetical protein EcolF_01002420 [Escherichia coli F11]	0.0	[26..598]	[1..573]
gi\|24375361, gi\|... - gi\|24375361\|ref\|NP_719404.1\| arylsulfate sulfotransferase [Shewanella oneidensis MR-1], gi\|24350185\|... SO3872 - arylsulfate sulfotransferase	0.0	[6..597]	[2..594]

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Predicted Domain #1

Region A:
Residues: [1-598]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDQYRKTIL AGAVALTCGL TAASTFAAGF QPAQPAGKLG AVVVDPYGNA PLTALVELDS  60
   61 HIISDVKVTV HGKGEKGVPV TYTVGKESLE TYDGIPIFGL YQKFANNVTV EYKENGKAMK 120
  121 DDYVVQTSAI VNHYMDNRSI SDLQQTKVIK VAPGFEDRLY LVNTHTFTPQ GAEFHWHGEK 180
  181 DKNAGILDAG PAGGALPFDI APYTFVVDTQ GEYRWWLDQD TFYNGHDMNI NKRGYLMGIR 240
  241 ETPRGTFTAV QGQHWYEFDM MGQILADHKL PRGFLDASHE SIETVNGTVL LRVGKRDYRK 300
  301 EDGIHVHTIR DQIIEVDKSG RVVDVWDLTK ILDPMRDALL GALDAGAVCV NVDLAHAGQQ 360
  361 AKLEPDTPYG DALGVGAGRN WAHVNSIAYD AKDDSIILSS RHQGIVKIGR DKQVKWILAP 420
  421 SKGWNKQLAS KLLKPVDDHG KPLTCDENGK CKDTDFDFTY TQHTAWLSSK GTLTVFDNGD 480
  481 GRGLEQPALP TMKYSRFVEY KIDEKKGTVQ QVWEYGKERG YDFYSPITSV VEYQKDRDTM 540
  541 FGFGGSINLF DVGKPTVGKL NEIDYKTKEV KVEIDVLSDK PNQTHYRALL VHPTQMFK

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.04
Match:	1yiqA
Description:	Molecular cloning and structural analysis of quinohemoprotein alcohol dehydrogenase ADHIIG from Pseudomonas putida HK5. Compariison to the other quinohemoprotein alcohol dehydrogenase ADHIIB found in the same microorganism.
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits