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View Structure Prediction Details

Protein: gi|221322385
Organism: Bacillus subtilis subsp. subtilis str. SMY
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221322385.

Description E-value Query
Range
Subject
Range
gi|228656885, gi... - gi|229126496|ref|ZP_04255510.1| Lipoyltransferase and lipoate-protein ligase [Bacillus cereus BDRD-C...
gi|229108652, gi... - gi|229108652|ref|ZP_04238263.1| Lipoyltransferase and lipoate-protein ligase [Bacillus cereus Rock1-...
gi|228957464, gi... - gi|228957464|ref|ZP_04119218.1| Lipoyltransferase and lipoate-protein ligase [Bacillus thuringiensis...
gi|29894784, gi|... - gi|30019241|ref|NP_830872.1| lipoate-protein ligase A [Bacillus cereus ATCC 14579], gi|29894784|gb|A...
347.0 [0..1] [331..1]

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Predicted Domain #1
Region A:
Residues: [1-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFIDNQNIN DPRINLAIEE YCVKHLDPEQ QYLLFYVNQP SIIIGKNQNT IEEINTKYVE  60
   61 ENGIIVVRRL SGGGAVYHDL GNLNFSFITK DDGDSFHNFK KFTEPVIQAL HQLGVEAELS 120
  121 GRNDIVVDGR KISGNAQFAT KGRIFSHGTL MFDSAIDHVV SALKVKKDKI ESKGIKSIRS 180
  181 RVANISEFLD DKMTTEEFRS HLLRHIFNTN DVGNVPEYKL TEKDWETIHQ ISKERYQNWD 240
  241 WNYGRSPKFN LNHSKRYPVG SIDLHLEVKK GKIEDCKIFG DFFGVGDVSE IENLLVGKQY 300
  301 ERSVIADVLE GVNLKHYFGN ITKEDFLDLI Y

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.154902
Match: 1vqzA
Description: Crystal structure of putative Lipoate-protein ligase (np_345629.1) from Streptococcus pneumoniae tigr4 at 1.99 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ligase activity, forming carbon-oxygen bonds 3.33073922220594 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 3.33073922220594 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 3.33034630936933 bayes_pls_golite062009
ligase activity 3.05852492533937 bayes_pls_golite062009
catalytic activity 2.36416267096403 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle