| Protein: | gi|208968305 |
| Organism: | synthetic construct |
| Length: | 599 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208968305.
| Description | E-value | Query Range |
Subject Range |
|
|
296.0 | [0..1] | [389..1] |
|
|
293.0 | [0..10] | [416..7] |
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291.0 | [0..10] | [416..84] |
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285.0 | [0..1] | [389..1] |
|
Region A: Residues: [1-177] |
1 11 21 31 41 51
| | | | | |
1 MGPKRRQLTF REKSRIIQEV EENPDLRKGE IARRFNIPPS TLSTILKNKR AILASERKYG 60
61 VASTCRKTNK LSPYDKLEGL LIAWFQQIRA AGLPVKGIIL KEKALRIAEE LGMDDFTASN 120
121 GWLDRFRRRH GVVSCSGVAR ARARNAAPRT PAAPASPAAV PSEGSGGSTT GWRAREE
|
| Detection Method: |  |
| Confidence: | 30.0 |
| Match: | 1hlvA |
| Description: | DNA-binding domain of centromere binding protein B (CENP-B) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [178-390] |
1 11 21 31 41 51
| | | | | |
1 QPPSVAEGYA SQDVFSATET SLWYDFLPDQ AAGLCGGDGR PRQATQRLSV LLCANADGSE 60
61 KLPPLVAGKS AKPRAGQAGL PCDYTANSKG GVTTQALAKY LKALDTRMAA ESRRVLLLAG 120
121 RLAAQSLDTS GLRHVQLAFF PPGTVHPLER GVVQQVKGHY RQAMLLKAMA ALEGQDPSGL 180
181 QLGLTEALHF VAAAWQAVEP SDIAACFREA GFG
|
| Detection Method: | |
| Confidence: | 69.744727 |
| Match: | PF03184.6 |
| Description: | No description for PF03184.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [391-525] |
1 11 21 31 41 51
| | | | | |
1 GGPNATITTS LKSEGEEEEE EEEEEEEEEG EGEEEEEEGE EEEEEGGEGE ELGEEEEVEE 60
61 EGDVDSDEEE EEDEESSSEG LEAEDWAQGV VEAGGSFGAY GAQEEAQCPT LHFLEGGEDS 120
121 DSDSEEEDDE EEDDE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [526-599] |
1 11 21 31 41 51
| | | | | |
1 DEDDDDDEED GDEVPVPSFG EAMAYFAMVK RYLTSFPIDD RVQSHILHLE HDLVHVTRKN 60
61 HARQAGVRGL GHQS
|
| Detection Method: | |
| Confidence: | 7.045757 |
| Match: | 1ufiA |
| Description: | Crystal structure of the dimerization domain of human CENP-B |
Matching Structure (courtesy of the PDB): |
|
