YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|47168593
Organism:	Homo sapiens
Length:	223 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|47168593.

Description	E-value	Query Range	Subject Range
CFAB_GORGO - Complement factor B OS=Gorilla gorilla gorilla GN=CFB PE=3 SV=1 gi\|29690187 - gi\|29690187\|gb\|AAM10005.1\| complement factor B precursor [Gorilla gorilla]	192.0	[0..1]	[223..254]
CFAB_PANTR - Complement factor B OS=Pan troglodytes GN=CFB PE=3 SV=1	191.0	[0..1]	[223..254]
CFB - complement factor B	191.0	[0..1]	[223..254]
gi\|73972308 - gi\|73972308\|ref\|XP_532086.2\| PREDICTED: similar to Complement factor B precursor (C3/C5 convertase) ...	190.0	[0..1]	[222..254]

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Predicted Domain #1

Region A:
Residues: [1-223]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEQQKRKIVL DPSGSMNIYL VLDGSDSIGA SNFTGAKKSL VNLIEKVASY GVKPRYGLVT  60
   61 YATYPKIWVK VSEADSSNAD WVTKQLNEIN YEDHKLKSGT NTKKALQAVY SMMSWPDDVP 120
  121 PEGWNRTRHV IILMTDGLHN MGGDPITVID EIRDLLYIGK DRKNPREDYL DVYVFGVGPL 180
  181 VNQVNINALA SKKDNEQHVF KVKDMENLED VFYQMIDESQ SLS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	49.0
Match:	2ok5A
Description:	No description for 2ok5A was found.

Predicted functions:

Term	Confidence	Notes
binding	0.0650247416983729	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: