YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|47168418, gi\|...
Organism:	Haemophilus influenzae
Length:	153 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|47168418, gi|....

Description	E-value	Query Range	Subject Range
gi\|145632186, gi... - gi\|145632186\|ref\|ZP_01787921.1\| hypothetical protein CGSHi3655_07024 [Haemophilus influenzae 3655], ... Y827_HAEIN - Uncharacterized acyl-CoA thioester hydrolase HI_0827 OS=Haemophilus influenzae (strain ATCC 51907 / ... Y827_HAEIN, YCIA... - (P44886) Putative acyl-CoA thioester hydrolase HI0827 (EC 3.1.2.-), Uncharacterized acyl-CoA thioest... gi\|229844695, gi... - gi\|229844695\|ref\|ZP_04464834.1\| hypothetical protein CGSHi6P18H1_03774 [Haemophilus influenzae 6P18H... gi\|145274446, gi... - gi\|145640932\|ref\|ZP_01796514.1\| hypothetical protein CGSHiR3021_07682 [Haemophilus influenzae R3021]... gi\|145640932 - gi\|145640932\|ref\|ZP_01796514.1\| hypothetical protein CGSHiR3021_07682 [Haemophilus influenzae R3021] gi\|145634761, gi... - gi\|145634761\|ref\|ZP_01790469.1\| Trp operon repressor [Haemophilus influenzae PittAA], gi\|145267927\|g...	151.0	[0..1]	[153..2]
gi\|144983966 - gi\|144983966\|gb\|EDJ91408.1\| putative acyl-CoA thioester hydrolase [Haemophilus influenzae R3021] gi\|48867705, gi\|... - gi\|68249422\|ref\|YP_248534.1\| putative acyl-CoA thioester hydrolase [Haemophilus influenzae 86-028NP]... gi\|145638371, gi... - gi\|145638371\|ref\|ZP_01793981.1\| Trp operon repressor [Haemophilus influenzae PittII], gi\|145272700\|g... gi\|46133151 - gi\|46133151\|ref\|ZP_00203092.1\| COG1607: Acyl-CoA hydrolase [Haemophilus influenzae R2866] gi\|145270139, gi... - gi\|145636613\|ref\|ZP_01792280.1\| Trp operon repressor [Haemophilus influenzae PittHH], gi\|145270139\|g... gi\|145630576 - gi\|145630576\|ref\|ZP_01786356.1\| putative acyl-CoA thioester hydrolase [Haemophilus influenzae 22.4-2...	150.0	[0..1]	[153..2]
gi\|148716688, gi... - gi\|148826528\|ref\|YP_001291281.1\| Trp operon repressor [Haemophilus influenzae PittEE], gi\|148716688\|... gi\|46129192 - gi\|46129192\|ref\|ZP_00202029.1\| COG1607: Acyl-CoA hydrolase [Haemophilus influenzae R2846] gi\|229845878, gi... - gi\|229845878\|ref\|ZP_04465990.1\| Trp operon repressor [Haemophilus influenzae 7P49H1], gi\|229810882\|g...	148.0	[0..1]	[153..2]
gi\|91187292, gi\|... - gi\|91214865\|ref\|ZP_01251838.1\| acyl CoA thioester hydrolase family protein [Psychroflexus torquis AT...	145.0	[0..4]	[149..1]
gi\|59711631, gi\|... - gi\|59711631\|ref\|YP_204407.1\| hydrolase [Vibrio fischeri ES114], gi\|59479732\|gb\|AAW85519.1\| predicted...	144.0	[0..11]	[135..17]
gi\|85820735, gi\|... - gi\|86133872\|ref\|ZP_01052454.1\| thioesterase superfamily protein [Polaribacter sp. MED152], gi\|858207...	143.0	[0..2]	[149..2]
gi\|86142718, gi\|... - gi\|86142718\|ref\|ZP_01061157.1\| acyl CoA thioester hydrolase family protein [Flavobacterium sp. MED21... gi\|86142718, gi\|... - gi\|86142718\|ref\|ZP_01061157.1\| acyl CoA thioester hydrolase family protein [Flavobacterium sp. MED21...	142.0	[0..7]	[153..3]
gi\|50084225, gi\|... - gi\|50084225\|ref\|YP_045735.1\| putative acyl-CoA thioester hydrolase [Acinetobacter sp. ADP1], gi\|4953...	141.0	[0..6]	[152..5]
gi\|52424791, gi\|... - gi\|52424791\|ref\|YP_087928.1\| hypothetical protein MS0736 [Mannheimia succiniciproducens MBEL55E], gi...	141.0	[0..8]	[146..7]
gi\|88803442, gi\|... - gi\|88803442\|ref\|ZP_01118968.1\| acyl CoA thioester hydrolase family protein [Polaribacter irgensii 23...	141.0	[0..7]	[152..4]

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Predicted Domain #1

Region A:
Residues: [1-153]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SANFTDKNGR QSKGVLLLRT LAMPSDTNAN GDIFGGWIMS QMDMGGAILA KEIAHGRVVT  60
   61 VAVESMNFIK PISVGDVVCC YGQCLKVGRS SIKIKVEVWV KKVASEPIGE RYCVTDAVFT 120
  121 FVAVDNNGRS RTIPRENNQE LEKALALISE QPL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	37.09691
Match:	1yliA
Description:	Structure of HI0827, a thioesterase acting on short-chain acyl-CoA compounds
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.74605540351792	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: