YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|17943439, gi\|...
Organism:	Homo sapiens
Length:	104 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17943439, gi|....

Description	E-value	Query Range	Subject Range
gi\|164519010, gi... - gi\|76642663\|ref\|XP_588495.2\| PREDICTED: similar to Myeloperoxidase precursor (MPO) [Bos taurus], gi\|...	161.0	[0..1]	[104..141]
PERM_MOUSE - Myeloperoxidase OS=Mus musculus GN=Mpo PE=2 SV=1	160.0	[0..1]	[104..141]
gi\|88180 - gi\|88180\|pir\|\|C28894 myeloperoxidase (EC 1.11.1.7), splice form H14 - human	159.0	[0..1]	[104..247]
gi\|114669606 - gi\|114669606\|ref\|XP_001162602.1\| PREDICTED: myeloperoxidase [Pan troglodytes]	159.0	[0..1]	[104..216]

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Predicted Domain #1

Region A:
Residues: [1-104]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CPEQDKYRTI TGMCNNRRSP TLGASNRAFV RWLPAEYEDG FSLPYGWTPG VKRNGFPVAL  60
   61 ARAVSNEIVR FPTDQLTPDQ ERSLMFMQWG QLLDHDLDFT PEPA

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Detection Method:	PSI-BLAST
Confidence:	38.39794
Match:	1mhlA
Description:	Myeloperoxidase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

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Top Sequence Alignment Hits