YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|42543420, gi\|...
Organism:	Homo sapiens
Length:	88 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42543420, gi|....

Description	E-value	Query Range	Subject Range
ACY1A_RAT - Aminoacylase-1A OS=Rattus norvegicus GN=Acy1a PE=1 SV=1	133.0	[0..1]	[88..321]
gi\|109039267 - gi\|109039267\|ref\|XP_001091857.1\| PREDICTED: similar to aminoacylase 1 isoform 1 [Macaca mulatta]	132.0	[0..1]	[88..425]
gi\|197098850 - gi\|197098850\|ref\|NP_001124673.1\| aminoacylase 1 [Pongo abelii] gi\|55725366 - gi\|55725366\|emb\|CAH89547.1\| hypothetical protein [Pongo abelii]	131.0	[0..1]	[88..325]
gi\|94386491 - gi\|94386491\|ref\|XP_914494.2\| PREDICTED: similar to aminoacylase 1 [Mus musculus]	130.0	[0..1]	[88..380]
gi\|114587152 - gi\|114587152\|ref\|XP_001170530.1\| PREDICTED: aminoacylase 1 isoform 3 [Pan troglodytes]	130.0	[0..1]	[88..350]

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Predicted Domain #1

Region A:
Residues: [1-88]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPWWAAFSRV CKDMNLTLEP EIMPAAGDNR YIRAVGVPAL GFSPMNRTPV LLHDHDERLH  60
   61 EAVFLRGVDI YTRLLPALAS VPALPSDS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	29.30103
Match:	1q7lB
Description:	Zn-binding domain of the T347G mutant of human aminoacylase-I
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits