YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|42543419, gi\|...
Organism:	Homo sapiens
Length:	198 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42543419, gi|....

Description	E-value	Query Range	Subject Range
ACY1_MOUSE - Aminoacylase-1 OS=Mus musculus GN=Acy1 PE=1 SV=1	181.0	[0..1]	[198..1]
gi\|91090496 - gi\|91090496\|ref\|XP_969212.1\| PREDICTED: similar to aminoacylase, putative [Tribolium castaneum]	178.0	[0..1]	[198..1]
gi\|197098850 - gi\|197098850\|ref\|NP_001124673.1\| aminoacylase 1 [Pongo abelii] gi\|55725366 - gi\|55725366\|emb\|CAH89547.1\| hypothetical protein [Pongo abelii]	177.0	[0..1]	[198..5]
gi\|124000649, gi... - gi\|124000649\|gb\|ABM87833.1\| aminoacylase 1 [synthetic construct], gi\|123982010\|gb\|ABM82834.1\| aminoa... ACY1 - aminoacylase 1 gi\|114587154, gi... - gi\|114587156\|ref\|XP_001170638.1\| PREDICTED: aminoacylase 1 isoform 6 [Pan troglodytes], gi\|114587154...	176.0	[0..1]	[198..1]
gi\|114587152 - gi\|114587152\|ref\|XP_001170530.1\| PREDICTED: aminoacylase 1 isoform 3 [Pan troglodytes]	175.0	[0..1]	[198..30]
ACY1A_RAT - Aminoacylase-1A OS=Rattus norvegicus GN=Acy1a PE=1 SV=1	175.0	[0..1]	[198..1]
ACY1_PIG - Aminoacylase-1 OS=Sus scrofa GN=ACY1 PE=1 SV=2 gi\|484363 - pir\|\|JN0584 aminoacylase (EC 3.5.1.14) I - pig	175.0	[0..1]	[198..1]

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Predicted Domain #1

Region A:
Residues: [1-198]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKGPEEEH PSVTLFRQYL RIRTVQPKPD YGAAVAFFEE TARQLGLGCQ KVEVAPGYVV  60
   61 TVLTWPGTNP TLSSILLNSH TDVVPVFKEH WSHDPFEAFK DSEGYIYARG AQDMKCVSIQ 120
  121 YLEAVRRLKV EGHRFPRTIH MTFVPDEEVG GHQGMELFVQ RPEFHALRAG FALDEGIANP 180
  181 TDAFTVFYSE RSPWWVRV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	44.045757
Match:	1q7lA
Description:	Zn-binding domain of the T347G mutant of human aminoacylase-I
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits