YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|42543242
Organism:	Geobacter sulfurreducens
Length:	71 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42543242.

Description	E-value	Query Range	Subject Range
gi\|39995473, gi\|... - gi\|39995473\|ref\|NP_951424.1\| cytochrome c3 [Geobacter sulfurreducens PCA], gi\|39982236\|gb\|AAR33697.1...	99.0	[0..2]	[70..22]
gi\|85774825, gi\|... - gi\|86158314\|ref\|YP_465099.1\| hypothetical protein Adeh_1891 [Anaeromyxobacter dehalogenans 2CP-C], g...	98.0	[0..1]	[69..47]
gi\|78194308, gi\|... - gi\|78223053\|ref\|YP_384800.1\| cytochrome c3 [Geobacter metallireducens GS-15], gi\|78194308\|gb\|ABB3207...	97.0	[0..1]	[71..21]

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Predicted Domain #1

Region A:
Residues: [1-71]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADDIVLKAKN GDVKFPHKAH QKAVPDCKKC HEKGPGKIEG FGKEMAHGKG CKGCHEEMKK  60
   61 GPTKCGECHK K

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Detection Method:	PSI-BLAST
Confidence:	18.522879
Match:	1os6A
Description:	Cytochrome c7 (PpcA) from Geobacter sulfurreducens
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

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Top Sequence Alignment Hits