YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|170765585, gi...
Organism:	Escherichia albertii TW07627
Length:	109 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|170765585, gi....

Description	E-value	Query Range	Subject Range
gi\|77978890 - gi\|77978890\|ref\|ZP_00834313.1\| COG3027: Uncharacterized protein conserved in bacteria [Yersinia inte...	113.0	[0..1]	[109..57]
ZAPA_SALTY - Cell division protein ZapA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=zapA P... gi\|29143328, gi\|... - gi\|29143328\|ref\|NP_806670.1\| Z-ring-associated protein [Salmonella enterica subsp. enterica serovar ... gi\|238909860 - gi\|238909860\|ref\|ZP_04653697.1\| Z-ring-associated protein [Salmonella enterica subsp. enterica serov... ZAPA_SALTI - Cell division protein ZapA OS=Salmonella typhi GN=zapA PE=3 SV=1 gi\|16761841 - gi\|16761841\|ref\|NP_457458.1\| Z-ring-associated protein [Salmonella enterica subsp. enterica serovar ... ZAPA_SALCH - Cell division protein zapA OS=Salmonella choleraesuis GN=zapA PE=3 SV=1 ZAPA_SALPA - Cell division protein ZapA OS=Salmonella paratyphi A GN=zapA PE=3 SV=1 ZAPA_SALPB - Cell division protein zapA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=zapA PE=3 SV=1 ZAPA_SALTY - Cell division protein ZapA OS=Salmonella typhimurium GN=zapA PE=3 SV=1 ZAPA_SALTI - Cell division protein zapA OS=Salmonella typhi GN=zapA PE=3 SV=1 ZAPA_SALTY - Cell division protein zapA OS=Salmonella typhimurium GN=zapA PE=3 SV=1 ZAPA_SALCH - Cell division protein ZapA OS=Salmonella choleraesuis GN=zapA PE=3 SV=1 lcl\|NC_016856.1_... - [gene=ygfE] [protein=Z-ring-associated protein] [protein_id=YP_005239200.1] [location=3240866..32411... ZAPA_SALPB - Cell division protein ZapA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=zapA PE=3 SV=1 gi\|168463765, gi... - gi\|195633478\|gb\|EDX51892.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero... gi\|168242852, gi... - gi\|205338122\|gb\|EDZ24886.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero... gi\|167990425, gi... - gi\|205331064\|gb\|EDZ17828.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero... gi\|167553252, gi... - gi\|205322290\|gb\|EDZ10129.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero... gi\|213999423 - gi\|213999423\|ref\|ZP_03410158.1\| Z-ring-associated protein [Salmonella enterica subsp. enterica serov... gi\|213974936 - gi\|213974936\|ref\|ZP_03402195.1\| Z-ring-associated protein [Salmonella enterica subsp. enterica serov... gi\|213854923 - gi\|213854923\|ref\|ZP_03383163.1\| Z-ring-associated protein [Salmonella enterica subsp. enterica serov... gi\|213648849 - gi\|213648849\|ref\|ZP_03378902.1\| Z-ring-associated protein [Salmonella enterica subsp. enterica serov... ZAPA_SALPC - Cell division protein ZapA OS=Salmonella paratyphi C (strain RKS4594) GN=zapA PE=3 SV=1 ZAPA_SALA4 - Cell division protein ZapA OS=Salmonella agona (strain SL483) GN=zapA PE=3 SV=1 ZAPA_SALHS - Cell division protein ZapA OS=Salmonella heidelberg (strain SL476) GN=zapA PE=3 SV=1 ZAPA_SALCH - Cell division protein ZapA OS=Salmonella choleraesuis (strain SC-B67) GN=zapA PE=3 SV=1 ZAPA_SALNS - Cell division protein ZapA OS=Salmonella newport (strain SL254) GN=zapA PE=3 SV=1 ZAPA_SALPA - Cell division protein ZapA OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=zapA PE=3 SV=1 gi\|205343295, gi... - gi\|205343295\|gb\|EDZ30059.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero... gi\|213427301 - gi\|213427301\|ref\|ZP_03360051.1\| Z-ring-associated protein [Salmonella enterica subsp. enterica serov... ZAPA_SALEP - Cell division protein ZapA OS=Salmonella enteritidis PT4 (strain P125109) GN=zapA PE=3 SV=1 ZAPA_SALG2 - Cell division protein ZapA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=zapA PE=3 SV=1 ZAPA_SALPK - Cell division protein ZapA OS=Salmonella paratyphi A (strain AKU_12601) GN=zapA PE=3 SV=1	103.0	[0..1]	[109..1]
ZAPA_SHIDS - Cell division protein ZapA OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=zapA PE=3 SV=1	102.0	[0..1]	[109..1]
ZAPA_SODGM - Cell division protein ZapA OS=Sodalis glossinidius (strain morsitans) GN=zapA PE=3 SV=1	102.0	[0..1]	[109..1]
gi\|89348488, gi\|... - gi\|89362693\|ref\|ZP_01200497.1\| similar to Uncharacterized protein conserved in bacteria [Xanthobacte...	102.0	[0..5]	[108..126]
gi\|238785667, gi... - gi\|77956687\|ref\|ZP_00820770.1\| COG3027: Uncharacterized protein conserved in bacteria [Yersinia berc...	101.0	[0..1]	[109..20]
ZAPA_ERWCT - Cell division protein ZapA OS=Erwinia carotovora subsp. atroseptica GN=zapA PE=3 SV=1 ZAPA_PECAS - Cell division protein ZapA OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=zapA ...	100.0	[0..1]	[109..1]
gi\|82409824, gi\|... - gi\|82701759\|ref\|YP_411325.1\| hypothetical protein Nmul_A0626 [Nitrosospira multiformis ATCC 25196], ...	100.0	[0..4]	[100..7]
RPA0947 - RPA0947 conserved hypothetical protein 1046985:1047395 forward MW:14446 gi\|192283193, gi... - gi\|192289444\|ref\|YP_001990049.1\| protein of unknown function DUF710 [Rhodopseudomonas palustris TIE-...	98.0	[0..2]	[108..9]
ZAPA_YERE8 - Cell division protein ZapA OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 /... gi\|77974491, gi\|... - gi\|77974491\|ref\|ZP_00830031.1\| COG3027: Uncharacterized protein conserved in bacteria [Yersinia fred... gi\|77961471 - gi\|77961471\|ref\|ZP_00825307.1\| COG3027: Uncharacterized protein conserved in bacteria [Yersinia moll... gi\|238795125, gi... - gi\|238795125\|ref\|ZP_04638715.1\| Cell division protein zapA [Yersinia intermedia ATCC 29909], gi\|2387... gi\|238707211, gi... - gi\|238754580\|ref\|ZP_04615934.1\| Cell division protein zapA [Yersinia ruckeri ATCC 29473], gi\|2387072...	98.0	[0..1]	[109..1]

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Predicted Domain #1

Region A:
Residues: [1-109]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAQPVDIQI FGRSLRVNCP PDQRDALNQA ADDLNQRLQD LKERTRVTNT EQLVFIAALN  60
   61 ISYELAQEKA KTRDYAASME QRIRMLQQTI EQALLEQGRI TEKTNQNFE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.0
Match:	1t3uA
Description:	Unknown conserved bacterial protein from Pseudomonas aeruginosa PAO1
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits