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View Structure Prediction Details

Protein: ARNC_ECOSE
Organism: Escherichia coli SE11
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARNC_ECOSE.

Description E-value Query
Range
Subject
Range
gi|75238042, gi|... - gi|75238042|ref|ZP_00722047.1| COG0463: Glycosyltransferases involved in cell wall biogenesis [Esche...
262.0 [0..1] [322..1]
gi|209765366, gi... - pir||E85865 probable sugar transferase Z3512 [imported] - Escherichia coli (strain O157:H7, substrai...
gi|208738905, gi... - gi|208818782|ref|ZP_03259102.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [...
gi|254794149, gi... - gi|254794149|ref|YP_003078986.1| Undecaprenyl-phosphate 4-amino-4-deoxy-L-arabinose transferase [Esc...
gi|208814420, gi... - gi|208814420|ref|ZP_03255749.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [...
gi|12516600, gi|... - gi|15802803|ref|NP_288830.1| undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase [Esc...
gi|208728519, gi... - gi|208808718|ref|ZP_03251055.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [...
ARNC_ECO57 - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Escherichia coli O157:H7 GN=ar...
gi|195935633 - gi|195935633|ref|ZP_03081015.1| undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase [...
gi|217327398, gi... - gi|217327398|ref|ZP_03443481.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [...
ARNC_ECO5E - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Escherichia coli O157:H7 (stra...
gi|189362984, gi... - gi|189362984|gb|EDU81403.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [Esch...
gi|189368273, gi... - gi|189368273|gb|EDU86689.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [Esch...
gi|189357690, gi... - gi|189357690|gb|EDU76109.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [Esch...
gi|168749665, gi... - gi|188016122|gb|EDU54244.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [Esch...
gi|189378876, gi... - gi|189378876|gb|EDU97292.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [Esch...
gi|168787164, gi... - gi|189372799|gb|EDU91215.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [Esch...
gi|189001895, gi... - gi|189001895|gb|EDU70881.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [Esch...
gi|168773018, gi... - gi|187771016|gb|EDU34860.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [Esch...
gi|15832396, gi|... - gi|15832396|ref|NP_311169.1| undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase [Esc...
261.0 [0..1] [322..1]
gi|75243069, gi|... - gi|75243069|ref|ZP_00726775.1| COG0463: Glycosyltransferases involved in cell wall biogenesis [Esche...
ARNC_ECOL5 - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Escherichia coli O6:K15:H31 (s...
ARNC_ECOK1 - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Escherichia coli O1:K1 / APEC ...
ARNC_ECOUT - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Escherichia coli (strain UTI89...
gi|227835663, gi... - gi|227887313|ref|ZP_04005118.1| glycosyltransferase [Escherichia coli 83972], gi|227835663|gb|EEJ461...
ARNC_ECOL6 - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Escherichia coli O6:H1 (strain...
gi|226901098, gi... - gi|237704732|ref|ZP_04535213.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [...
ARNC_ECO45 - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Escherichia coli O45:K1 (strai...
ARNC_ECOL6 - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Escherichia coli O6 GN=arnC PE...
ARNC_ECO81 - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Escherichia coli O81 (strain E...
261.0 [0..1] [322..1]
ARNC_ECO8A - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Escherichia coli O8 (strain IA...
gi|193062339, gi... - gi|75259717|ref|ZP_00731019.1| COG0463: Glycosyltransferases involved in cell wall biogenesis [Esche...
gi|194427160, gi... - gi|75211662|ref|ZP_00711741.1| COG0463: Glycosyltransferases involved in cell wall biogenesis [Esche...
ARNC_ECO24 - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Escherichia coli O139:H28 (str...
259.0 [0..1] [322..1]
gi|24113630, gi|... - gi|24113630|ref|NP_708140.1| undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase [Shi...
ARNC_SHIFL - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Shigella flexneri GN=arnC PE=3...
258.0 [0..1] [322..1]
ARNC_SHIF8 - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Shigella flexneri serotype 5b ...
258.0 [0..1] [322..1]
gi|30041940, gi|... - gi|30063685|ref|NP_837856.1| undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase [Shi...
257.0 [0..1] [322..1]
ARNC_YERPB - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Yersinia pseudotuberculosis se...
ARNC_YERPY - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Yersinia pseudotuberculosis se...
ARNC_YERPP - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Yersinia pestis (strain Pestoi...
ARNC_YERPS - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Yersinia pseudotuberculosis se...
ARNC_YERPS - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Yersinia pseudotuberculosis GN...
255.0 [0..1] [321..1]
gi|77962216 - gi|77962216|ref|ZP_00826039.1| COG0463: Glycosyltransferases involved in cell wall biogenesis [Yersi...
254.0 [0..1] [321..1]
gi|218929509, gi... - gi|218929509|ref|YP_002347384.1| undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase ...
gi|167056031, gi... - gi|167424844|ref|ZP_02316597.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (...
gi|45441998, gi|... - gi|45441998|ref|NP_993537.1| undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase [Yer...
gi|167469209 - gi|167469209|ref|ZP_02333913.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [...
ARNC_YERPG - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Yersinia pestis bv. Antiqua (s...
gi|229688055, gi... - gi|229898507|ref|ZP_04513652.1| Undecaprenyl-phosphate 4-amino-4-deoxy-L-arabinose transferase [Yers...
gi|229895106, gi... - gi|229895106|ref|ZP_04510282.1| Undecaprenyl-phosphate 4-amino-4-deoxy-L-arabinose transferase [Yers...
gi|229837946, gi... - gi|229837946|ref|ZP_04458105.1| Undecaprenyl-phosphate 4-amino-4-deoxy-L-arabinose transferase [Yers...
gi|165920538, gi... - gi|165927483|ref|ZP_02223315.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (...
gi|89105347, gi|... - gi|89105347|ref|ZP_01177868.1| COG0463: Glycosyltransferases involved in cell wall biogenesis [Yersi...
gi|165989302, gi... - gi|166011837|ref|ZP_02232735.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (...
ARNC_YERPA - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Yersinia pestis bv. Antiqua (s...
gi|166211162, gi... - gi|166211162|ref|ZP_02237197.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (...
ARNC_YERPN - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Yersinia pestis bv. Antiqua (s...
gi|167049765, gi... - gi|167400912|ref|ZP_02306418.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (...
gi|166958944, gi... - gi|167422132|ref|ZP_02313885.1| undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (...
gi|149365671, gi... - gi|149365671|ref|ZP_01887706.1| Undecaprenyl-phosphate 4-amino-4-deoxy-L-arabinose transferase [Yers...
gi|21958738, gi|... - gi|22125811|ref|NP_669234.1| undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase [Yer...
ARNC_YERPE - Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase OS=Yersinia pestis GN=arnC PE=3 S...
253.0 [0..1] [321..1]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEIHPVKKV SVVIPVYNEQ ESLPELIRRT TTACESLGKE YEILLIDDGS SDNSAHMLVE  60
   61 ASQAENSHIV SILLNRNYGQ HSAIMAGFSH VTGDLIITLD ADLQNPPEEI PRLVAKADEG 120
  121 YDVVGTVRQN RQDSWFRKTA SKMINRLIQR TTGKAMGDYG CMLRAYRRHI VDAMLHCHER 180
  181 STFIPILANI FARRAIEIPV HHAEREFGES KYSFMRLINL MYDLVTCLTT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 2d7iA
Description: No description for 2d7iA was found.

Predicted Domain #2
Region A:
Residues: [231-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPLRMLSLLG SIIAIGGFSI AVLLVILRLT FGPQWAAEGV FMLFAVLFTF IGAQFIGMGL  60
   61 LGEYIGRIYT DVRARPRYFV QQVIRPSSKE NE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle