YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39654303, gi\|...
Organism:	Thermotoga maritima
Length:	219 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39654303, gi|....

Description	E-value	Query Range	Subject Range
HIS1_RHOFT - ATP phosphoribosyltransferase OS=Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) G...	264.0	[0..2]	[199..1]
gi\|71740099, gi\|... - gi\|71839403\|ref\|ZP_00679152.1\| ATP phosphoribosyltransferase [Pelobacter propionicus DSM 2379], gi\|7...	263.0	[0..3]	[199..5]
gi\|254478837, gi... - gi\|254478837\|ref\|ZP_05092203.1\| ATP phosphoribosyltransferase [Carboxydibrachium pacificum DSM 12653... HIS1_THETN - ATP phosphoribosyltransferase OS=Thermoanaerobacter tengcongensis GN=hisG PE=3 SV=1 HIS1_CALS4 - ATP phosphoribosyltransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 1524...	263.0	[0..2]	[201..3]
gi\|95929010, gi\|... - gi\|95929010\|ref\|ZP_01311755.1\| ATP phosphoribosyltransferase [Desulfuromonas acetoxidans DSM 684], g...	262.0	[0..3]	[207..5]
HIS1_GEOMG - ATP phosphoribosyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN...	262.0	[0..3]	[199..5]
gi\|88916666, gi\|... - gi\|88936608\|ref\|ZP_01142213.1\| ATP phosphoribosyltransferase [Geobacter uraniumreducens Rf4], gi\|889...	261.0	[0..3]	[199..27]
HIS12_GEOSL, HI1... - ATP phosphoribosyltransferase 2 OS=Geobacter sulfurreducens GN=hisG2 PE=3 SV=1, (P60836) ATP phospho... HIS12_GEOSL - ATP phosphoribosyltransferase 2 OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN...	261.0	[0..3]	[199..5]
gi\|221563080, gi... - gi\|222053791\|ref\|YP_002536153.1\| ATP phosphoribosyltransferase [Geobacter sp. FRC-32], gi\|221563080\|...	260.0	[0..3]	[199..5]
gi\|207744509, gi... - gi\|207744509\|ref\|YP_002260901.1\| atp phosphoribosyltransferase (atp-prtase) protein [Ralstonia solan... gi\|207721831, gi... - gi\|207721831\|ref\|YP_002252269.1\| atp phosphoribosyltransferase (atp-prtase) protein [Ralstonia solan... gi\|83748215, gi\|... - gi\|83748215\|ref\|ZP_00945242.1\| ATP phosphoribosyltransferase [Ralstonia solanacearum UW551], gi\|8372...	260.0	[0..1]	[208..9]
HIS1_PELCD - ATP phosphoribosyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=hisG PE=3 S...	260.0	[0..3]	[202..5]

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Predicted Domain #1

Region A:
Residues: [1-219]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLLKLAIPKG RLEEKVXTYL KKTGVIFERE SSILREGKDI VCFXVRPFDV PTYLVHGVAD  60
   61 IGFCGTDVLL EKETSLIQPF FIPTNISRXV LAGPKGRGIP EGEKRIATKF PNVTQRYCES 120
  121 KGWHCRIIPL KGSVELAPIA GLSDLIVDIT ETGRTLKENN LEILDEIFVI RTHVVVNPVS 180
  181 YRTKREEVVS FLEKLQEVIE HDSNEQSRGE GGSHHHHHH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	68.69897
Match:	1o63A
Description:	Crystal structure of an ATP phosphoribosyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
ATP phosphoribosyltransferase activity	2.05227933205562	bayes_pls_golite062009
catalytic activity	1.04475291968158	bayes_pls_golite062009
transferase activity, transferring pentosyl groups	0.62944815546517	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: