YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|166210576, gi...
Organism:	Yersinia pestis biovar Antiqua str. B42003004
Length:	291 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|166210576, gi....

Description	E-value	Query Range	Subject Range
gi\|77973573, gi\|... - gi\|77973573\|ref\|ZP_00829120.1\| COG0676: Uncharacterized enzymes related to aldose 1-epimerase [Yersi...	1.0E-76	[1..291]	[1..291]
gi\|238794507, gi... - gi\|77977683\|ref\|ZP_00833125.1\| COG0676: Uncharacterized enzymes related to aldose 1-epimerase [Yersi...	3.0E-76	[1..291]	[1..291]
gi\|77629165 - gi\|77629165\|ref\|ZP_00791751.1\| COG0676: Uncharacterized enzymes related to aldose 1-epimerase [Yersi...	9.0E-76	[1..291]	[1..291]
gi\|238718789, gi... - gi\|77962063\|ref\|ZP_00825889.1\| COG0676: Uncharacterized enzymes related to aldose 1-epimerase [Yersi...	2.0E-74	[1..291]	[1..291]
gi\|238712939, gi... - gi\|77956442\|ref\|ZP_00820540.1\| COG0676: Uncharacterized enzymes related to aldose 1-epimerase [Yersi...	9.0E-74	[1..290]	[1..290]
gi\|215741267, gi... - gi\|215741267\|dbj\|BAG97762.1\| unnamed protein product [Oryza sativa Japonica Group], gi\|215678871\|dbj...	2.0E-72	[12..291]	[7..303]
gi\|157154792, gi... - gi\|75190811\|ref\|ZP_00704078.1\| COG0676: Uncharacterized enzymes related to aldose 1-epimerase [Esche...	3.0E-72	[1..289]	[8..300]
gi\|75255301 - gi\|75255301\|ref\|ZP_00727134.1\| COG0676: Uncharacterized enzymes related to aldose 1-epimerase [Esche... gi\|75210257 - gi\|75210257\|ref\|ZP_00710425.1\| COG0676: Uncharacterized enzymes related to aldose 1-epimerase [Esche...	6.0E-72	[1..289]	[8..300]
gi\|49176149, gi\|... - gi\|49176149\|ref\|NP_416294.3\| hypothetical protein b1780 [Escherichia coli K12], gb\|AAC74850.1\| orf, ... gi\|7466229 - gi\|7466229\|pir\|\|D64938 hypothetical protein b1780 - Escherichia coli (strain K-12) gi\|157066921, gi... - gi\|75195848\|ref\|ZP_00705918.1\| COG0676: Uncharacterized enzymes related to aldose 1-epimerase [Esche...	6.0E-72	[1..289]	[8..300]

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Predicted Domain #1

Region A:
Residues: [1-291]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEKVFTLPV VEQISPYISQ RQLDELPVVV VSHPKVRAAI SLQGAHLLAY QPSGEQPIIW  60
   61 LSNNTPFKEG IAIRGGVPIC WPWFGPTAQP AHGFARILPW TLSAHDENEN GVILTFTLED 120
  121 NDMTRQYWPH AFTLIARFKL GDECEVELES HGDYQAAAAL HTYFQIGDIS QIKVSGLGEK 180
  181 YLDKVLKVAD VTQQGDLVFN GQTDRVYTQP EAYSLIKDAA LKRTIEVHHH HQSDVVAWNP 240
  241 GAELSCSMVD MPNDGYKTMV CVETARVNKP LVAAPDAPAR LAMTIRSRKN T

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	69.09691
Match:	2htaA
Description:	No description for 2htaA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits