YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|239782131, gi...
Organism:	Homo sapiens
Length:	237 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|239782131, gi....

Description	E-value	Query Range	Subject Range
gi\|114661620 - gi\|114661620\|ref\|XP_001163585.1\| PREDICTED: polo-like kinase isoform 1 [Pan troglodytes]	368.0	[0..1]	[237..478]
PLK1 - polo-like kinase 1 (Drosophila) gi\|123995097, gi... - gi\|123995097\|gb\|ABM85150.1\| polo-like kinase 1 (Drosophila) [synthetic construct], gi\|123980284\|gb\|A...	365.0	[0..1]	[237..367]
gi\|60652559, gi\|... - gi\|60652561\|gb\|AAX28975.1\| polo-like kinase 1 [synthetic construct], gi\|60652559\|gb\|AAX28974.1\| polo...	365.0	[0..1]	[237..367]
gi\|67969022 - gi\|67969022\|dbj\|BAE00866.1\| unnamed protein product [Macaca fascicularis]	365.0	[0..1]	[237..367]
gi\|109103744 - gi\|109103744\|ref\|XP_001092070.1\| PREDICTED: polo-like kinase [Macaca mulatta]	365.0	[0..1]	[237..367]
gi\|73958732 - gi\|73958732\|ref\|XP_547091.2\| PREDICTED: similar to Serine/threonine-protein kinase PLK1 (Polo-like k...	364.0	[0..2]	[237..596]

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Predicted Domain #1

Region A:
Residues: [1-237]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEVVDCHLSD MLQQLHSVNA SKPSERGLVR QEEAEDPACI PIFWVSKWVD YSDKYGLGYQ  60
   61 LCDNSVGVLF NDSTRLILYN DGDSLQYIER DGTESYLTVS SHPNSLMKKI TLLKYFRNYM 120
  121 SEHLLKAGAN ITPREGDELA RLPYLRTWFR TRSAIILHLS NGSVQINFFQ DHTKLILCPL 180
  181 MAAVTYIDEK RDFRTYRLSL LEEYGCCKEL ASRLRYARTM VDKLLSSRSA SNRLKAS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	100.0
Match:	1q4kB
Description:	The polo-box domain of Plk1 in complex with a phospho-peptide
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits