YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|168488584, gi...
Organism:	Streptococcus pneumoniae SP195
Length:	120 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|168488584, gi....

Description	E-value	Query Range	Subject Range
ACPS_STRTD - Holo-[acyl-carrier-protein] synthase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=...	149.0	[0..1]	[117..1]
ACPS_STRT1 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=acpS PE=3 S... ACPS_STRT2 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)... gi\|55737684, gi\|... - gb\|AAV63246.1\| holo-(acyl carrier protein) synthase [Streptococcus thermophilus CNRZ1066], gb\|AAV61...	148.0	[0..1]	[117..1]
gi\|15988407, gi\|... - gi\|15988408\|pdb\|1FTH\|C Chain C, Crystal Structure Of Streptococcus Pneumoniae Acyl Carrier Protein S...	147.0	[0..1]	[120..3]
ACPS_STRPB - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=acp... ACPS_STRPC - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=acp...	138.0	[0..1]	[115..1]
ACPS_STRA5 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus agalactiae serotype V GN=acpS PE=3 SV=1 ACPS_STRA1 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus agalactiae serotype Ia GN=acpS PE=3 SV=1 ACPS_STRA3 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus agalactiae serotype III GN=acpS PE=3 SV=1 ACPS_STRA1 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus agalactiae serotype Ia (strain ATCC 27591 / A9... gi\|77414521, gi\|... - gi\|77414521\|ref\|ZP_00790667.1\| holo-(acyl-carrier-protein) synthase [Streptococcus agalactiae 515], ... gi\|77161538, gi\|... - gi\|77412403\|ref\|ZP_00788711.1\| holo-(acyl-carrier-protein) synthase [Streptococcus agalactiae CJB111... gi\|77172390, gi\|... - gi\|77409006\|ref\|ZP_00785726.1\| holo-(acyl-carrier-protein) synthase [Streptococcus agalactiae COH1],... ACPS_STRA3 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus agalactiae serotype III (strain NEM316) GN=acp... gi\|77406431, gi\|... - gi\|77406431\|ref\|ZP_00783489.1\| holo-(acyl-carrier-protein) synthase [Streptococcus agalactiae H36B],... ACPS_STRA5 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2...	137.0	[0..1]	[116..1]
gi\|221086403, gi... - gi\|221086403\|ref\|ZP_03555945.1\| holo-acyl-carrier-protein synthase [Geobacillus sp. Y412MC61], gi\|22... ACPS_GEOKA - Holo-[acyl-carrier-protein] synthase OS=Geobacillus kaustophilus (strain HTA426) GN=acpS PE=3 SV=1 gi\|229499573, gi... - gi\|229499573\|ref\|ZP_04393256.1\| holo-acyl-carrier-protein synthase [Geobacillus sp. Y412MC52], gi\|22... ACPS_GEOKA - Holo-[acyl-carrier-protein] synthase OS=Geobacillus kaustophilus GN=acpS PE=3 SV=1	137.0	[0..1]	[118..1]
ACPS_STRPM - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M28 GN=acpS PE=3 SV=1 ACPS_STRPM - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M28 (strain MGAS6180) GN=acp...	137.0	[0..1]	[115..1]
ACPS_STRP1 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M1 GN=acpS PE=3 SV=1 gi\|71911346, gi\|... - gi\|71911346\|ref\|YP_282896.1\| 4'-phosphopantetheinyl transferase [Streptococcus pyogenes MGAS5005], g... ACPS_STRPY - (Q99Y97) Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7) (Holo-ACP synthase) (4'-phosphopantethein... gi\|15675638, gi\|... - gi\|15675638\|ref\|NP_269812.1\| 4'-phosphopantetheinyl transferase [Streptococcus pyogenes M1 GAS], gi\|...	137.0	[0..1]	[115..1]
gi\|56808268 - gi\|56808268\|ref\|ZP_00366036.1\| COG0736: Phosphopantetheinyl transferase (holo-ACP synthase) [Strepto... ACPS_STRP3 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M3 GN=acpS PE=3 SV=1 ACPS_STRP6 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M6 GN=acpS PE=3 SV=1 ACPS_STRPG - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=acpS... ACPS_STRP8 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M18 GN=acpS PE=3 SV=1 ACPS_STRP6 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MG... ACPS_STRP8 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=acp... ACPS_STRPQ - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=acpS PE... ACPS_STRP3 - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MG... ACPS_STRPZ - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=acpS P... ACPS_STRPD - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=acp... ACPS_STRPF - Holo-[acyl-carrier-protein] synthase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=acp...	137.0	[0..1]	[115..1]
ACPS_ENTFA - Holo-[acyl-carrier-protein] synthase OS=Enterococcus faecalis (strain ATCC 700802 / V583) GN=acpS PE... gi\|227554960, gi... - gi\|227554960\|ref\|ZP_03985007.1\| holo-(acyl-carrier-protein) synthase [Enterococcus faecalis HH22], g... ACPS_ENTFA - Holo-[acyl-carrier-protein] synthase OS=Enterococcus faecalis GN=acpS PE=3 SV=1	136.0	[0..1]	[116..1]

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Predicted Domain #1

Region A:
Residues: [1-120]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVGHGIDIE ELASIESAVT RHEGFAKRVL TAQEMERFTS LKGRRQIEYL AGRWSAKEAF  60
   61 SKAMGTGISK LGFQDLEVLN NERGAPYFSQ APFSGKIWLS ISHTDQFVTA SVILEENHES 120
  121

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	36.0
Match:	1fteA
Description:	Holo-(acyl carrier protein) synthase ACPS
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
holo-[acyl-carrier-protein] synthase activity	3.16041523883346	bayes_pls_golite062009
phosphotransferase activity, for other substituted phosphate groups	3.07692326713136	bayes_pls_golite062009
catalytic activity	1.85383781679828	bayes_pls_golite062009
transferase activity	0.733560176609492	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.571740867528267	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: