YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|170688474, gi...
Organism:	Bacillus anthracis str. A0465
Length:	343 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|170688474, gi....

Description	E-value	Query Range	Subject Range
gi\|47570274, gi\|... - gi\|47570274\|ref\|ZP_00240924.1\| oxidoreductase, Gfo/Idh/MocA family VCA0099 [Bacillus cereus G9241], ...	3.0E-79	[1..343]	[1..343]
gi\|51975410, gi\|... - gi\|52141941\|ref\|YP_084888.1\| Gfo/Idh/MocA family oxidoreductase [Bacillus cereus E33L], gi\|51975410\|...	3.0E-78	[1..343]	[1..343]
gi\|42738591, gi\|... - gi\|42782665\|ref\|NP_979912.1\| Gfo/Idh/MocA family oxidoreductase [Bacillus cereus ATCC 10987], gi\|427...	1.0E-77	[1..343]	[1..343]
gi\|228812457, gi... - gi\|228947210\|ref\|ZP_04109504.1\| Oxidoreductase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1],... gi\|228830966, gi... - gi\|228928647\|ref\|ZP_04091683.1\| Oxidoreductase [Bacillus thuringiensis serovar pondicheriensis BGSC ... gi\|49329843, gi\|... - gi\|49478287\|ref\|YP_037675.1\| Gfo/Idh/MocA family oxidoreductase [Bacillus thuringiensis serovar konk... gi\|218538034, gi... - gi\|218904722\|ref\|YP_002452556.1\| oxidoreductase, Gfo/Idh/MocA family [Bacillus cereus AH820], gi\|218... gi\|195993293, gi... - gi\|196034219\|ref\|ZP_03101629.1\| oxidoreductase, Gfo/Idh/MocA family [Bacillus cereus W], gi\|19599329...	1.0E-77	[1..343]	[1..343]
gi\|74489480, gi\|... - gi\|75763033\|ref\|ZP_00742823.1\| NADH-dependent dehydrogenase [Bacillus thuringiensis serovar israelen... gi\|218898689, gi... - gi\|218898689\|ref\|YP_002447100.1\| oxidoreductase, Gfo/Idh/MocA family [Bacillus cereus G9842], gi\|218...	1.0E-77	[1..343]	[1..343]
gi\|152024724, gi... - gi\|89202827\|ref\|ZP_01181534.1\| Semialdehyde dehydrogenase, NAD - binding:Oxidoreductase, N-terminal:...	7.0E-74	[1..342]	[1..342]
gi\|52081873, gi\|... - gi\|52787261\|ref\|YP_093090.1\| YvaA [Bacillus licheniformis ATCC 14580], gi\|52349763\|gb\|AAU42397.1\| Yv...	2.0E-73	[3..342]	[4..347]
gi\|29897251, gi\|... - gi\|30021696\|ref\|NP_833327.1\| oxidoreductase [Bacillus cereus ATCC 14579], gi\|29897251\|gb\|AAP10528.1\|...	5.0E-73	[1..343]	[1..343]
gi\|67157471 - gi\|67157471\|ref\|ZP_00418720.1\| Oxidoreductase, N-terminal:Oxidoreductase, C-terminal [Azotobacter vi... gi\|67085379, gi\|... - gi\|67157471\|ref\|ZP_00418720.1\| Oxidoreductase, N-terminal:Oxidoreductase, C-terminal [Azotobacter vi...	3.0E-71	[4..343]	[2..340]
gi\|37526276, gi\|... - gi\|37526276\|ref\|NP_929620.1\| putative oxidoreductase [Photorhabdus luminescens subsp. laumondii TTO1...	1.0E-70	[1..342]	[1..345]

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Predicted Domain #1

Region A:
Residues: [1-343]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIGVGIVG FGFSSTTFHI PLLQTIEEYD IRAVLSSKEE VVKETLPNVT VVSTIDELVK  60
   61 RADIDLVVIT SPNTTHFPYV KEAILNGKHV VVEKPFVVSI EEGEELISLA KKHNVVLSVY 120
  121 HNRRFDNDFL TIKKLLEEDR IGNLYAYEAH FDRFRPHVRD RWREKNLPGS GILYDLGSHL 180
  181 IDQALSLFGK PDAIRADIIK QRPGAEVDDY FHIVLHYGVK RVILRSSSYV KKAGPHFTMH 240
  241 GDKGSIVKYG MDSQEEQLKN GMKPGDNGYG VDTEANFATV ETEEELVRIP TEVGCYDMYY 300
  301 KRVRDSIVNG EKPPVTAQEG LEVIKLIQLA VESSETGRII FIK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	56.30103
Match:	1h6aA
Description:	Glucose-fructose oxidoreductase, N-terminal domain; Glucose-fructose oxidoreductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.79741889688267	bayes_pls_golite062009
oxidoreductase activity	0.120113583068184	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: