YRC Public Data Repository - Protein Structure Prediction

Protein:	FABA_PSEA8
Organism:	Pseudomonas aeruginosa LESB58
Length:	171 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FABA_PSEA8.

Description	E-value	Query Range	Subject Range
FABA_PSEU2 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas syringae pv. syringae (strain B7... tr\|F3G8R0\|F3G8R0... - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas syringae pv. pisi str. 1704B GN=...	3.0E-58	[1..171]	[1..171]
gi\|88859243, gi\|... - gi\|88859243\|ref\|ZP_01133883.1\| beta-hydroxydecanoyl thioester dehydrase (trans-2-decenoyl-ACP isomer...	4.0E-58	[1..171]	[1..171]
FABA_PSE14 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas savastanoi pv. phaseolicola (str...	6.0E-58	[1..171]	[1..171]
FABA_PSEF5 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC ...	6.0E-58	[1..171]	[1..171]
gi\|49081544 - gi\|49081544\|gb\|AAT50172.1\| PA1610 [synthetic construct]	9.0E-58	[1..171]	[1..171]
FABA_AZOVD - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Azotobacter vinelandii (strain DJ / ATCC BAA... gi\|67155915, gi\|... - gi\|67155915\|ref\|ZP_00417542.1\| Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA [Azotobacter...	1.0E-57	[1..171]	[1..171]
FABA_PSESM - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas syringae pv. tomato (strain DC30... gi\|213927152, gi... - gi\|213968172\|ref\|ZP_03396317.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA [Pseudomona... FABA_PSESM - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas syringae pv. tomato GN=fabA PE=3...	1.0E-57	[1..171]	[1..171]
FABA_PSEPF - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fa...	2.0E-57	[1..171]	[1..171]
gi\|95111632 - gi\|95111632\|emb\|CAK16353.1\| beta-hydroxydecanoyl thioester dehydrase (trans-2-decenoyl-ACP isomerase... FABA_PSEE4 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas entomophila (strain L48) GN=fabA...	2.0E-57	[1..171]	[1..171]
FABA_PSEP1 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas putida (strain F1 / ATCC 700007)... tr\|E4RE81\|E4RE81... - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas putida (strain BIRD-1) GN=fabA P... tr\|I7AZR4\|I7AZR4... - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas putida (strain DOT-T1E) GN=fabA ... FABA_PSEPK - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas putida (strain KT2440) GN=fabA P...	2.0E-57	[1..171]	[1..171]

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Predicted Domain #1

Region A:
Residues: [1-171]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKQHAFTRE DLLRCSRGEL FGPGNAQLPA PNMLMIDRIV HISDVGGKYG KGELVAELDI  60
   61 NPDLWFFACH FEGDPVMPGC LGLDAMWQLV GFYLGWQGNP GRGRALGSGE VKFFGQVLPT 120
  121 AKKVTYNIHI KRTINRSLVL AIADGTVSVD GREIYSAEGL RVGLFTSTDS F

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	56.0
Match:	2cf2C
Description:	No description for 2cf2C was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits