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View Structure Prediction Details

Protein: Y1648_ARATH
Organism: Arabidopsis thaliana
Length: 225 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1648_ARATH.

Description E-value Query
Range
Subject
Range
gi|12322258, gi|... - pir||D96690 hypothetical protein F28G11.8 [imported] - Arabidopsis thaliana, gi|12322258|gb|AAG5115...
279.0 [0..1] [225..1]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSITVKRK RAKVMKIDGE TFRIKTPVTA REVTADYPGY VLLDSQAVKH FGVRSKPLEP  60
   61 NQTLKPKKTY FLVELPKLPP ETTAVDTENK LPYRRVMSGI H

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [102-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGAKERLDML MLSRRTVSDV TIGRSDGGDG FGPELGPGHT SVRLRLPRSQ ITKLMEENNN  60
   61 DASAIAEKIL GIYMERSGEL GGGRGGVDGR RELGSGEIKA REKQVSFAGE GGRELPVLWS 120
  121 RSGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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