YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|209540893, gi...
Organism:	Streptococcus pyogenes NZ131
Length:	323 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|209540893, gi....

Description	E-value	Query Range	Subject Range
gi\|182628928, gi... - gi\|182683594\|ref\|YP_001835341.1\| glucokinase [Streptococcus pneumoniae CGSP14], gi\|182628928\|gb\|ACB8... gi\|194357009, gi... - gi\|194397342\|ref\|YP_002037324.1\| glucokinase [Streptococcus pneumoniae G54], gi\|194357009\|gb\|ACF5545... gi\|66879641, gi\|... - gi\|66879641\|ref\|ZP_00404658.1\| COG1940: Transcriptional regulator/sugar kinase [Streptococcus pneumo... gi\|25511505 - pir\|\|H97944 glucokinase (EC 2.7.1.2) [imported] - Streptococcus pneumoniae (strain R6) gi\|15902628, gi\|... - gi\|15902628\|ref\|NP_358178.1\| glucokinase [Streptococcus pneumoniae R6], gi\|15458164\|gb\|AAK99388.1\| G...	268.0	[0..1]	[319..7]

Back

Predicted Domain #1

Region A:
Residues: [1-323]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKLLGIDL GGTTIKFGIL TAAGEVQEKW AIETNILEGG KHIVPDIIAS IKHRLDLYGL  60
   61 SSADFVGIGM GSPGAVDRDT NTVTGAFNLN WKETQEVGSV VEKELGIPFA IDNDANVAAL 120
  121 GERWVGAGEN NPDVVFMTLG TGVGGGIIAD GNLIHGVAGA GGEIGHMIVE PENGFACTCG 180
  181 SHGCLETVAS ATGVVKVARL LAEAYEGDSA IKAAIDNGEG VTSKDIFMAA EAGDSFADSV 240
  241 VEKVGYYLGL ASANISNILN PDSVVIGGGV SAAGEFLRSR IEKYFVTFTF PQVRYSTKIK 300
  301 IAELGNDAGI IGAASLARQF ITK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	69.69897
Match:	2qm1A
Description:	No description for 2qm1A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits