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View Structure Prediction Details

Protein: CPY57_ARATH
Organism: Arabidopsis thaliana
Length: 504 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CPY57_ARATH.

Description E-value Query
Range
Subject
Range
gi|3688187, gi|7... - pir||T05314 hypothetical protein F26P21.180 - Arabidopsis thaliana, gi|7270253|emb|CAB80023.1| putat...
257.0 [0..1] [459..1]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTVYVLEPP TKGKVIVNTT HGPIDVELWP KEAPKSVRNF VQLCLEGYFD NTIFHRVIPG  60
   61 FLVQGGDPTG SGTGGDSIYG GVFADEFHSR LRFSHRGIVA MANASSPNSN GSQFFFTLDK 120
  121 CDWLDKKHTI FGKVTGDSIY NLLRLGEVDT SKDDRPLDPA PKILSVEVLW 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.69897
Match: 2hq6A
Description: No description for 2hq6A was found.

Predicted Domain #2
Region A:
Residues: [171-504]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPFEDIVPRV LAKTSEESAA EIKEPPTKPV KKLNLLSFGE EAEEEEKELA VVKQKIKSSH  60
   61 DVLNDPRLLK AEASDKERNA SESKEVLSVR EALNAKKEAA QKDKSFSVSD TVGNSDDDDD 120
  121 GEDETKFDAK MRNQVLSRRK EIGDTPSKPT QKKKSSSLKG REESTQRSDA VSSEDEKPRM 180
  181 EKLSLKKKGI GSEAKAEHME KGDTDLQLYN ASERARQLHK LKKRRLQGNE DSVLAKLEKF 240
  241 KQSISAKPFT SSNEPVVLTS SSEPVDNKEE DLSDWKNVKL KFAPERGKDK MSRRDDPDAY 300
  301 MVVDPLLEKG KEKFNRMQAK QKRREREWSG KSLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle