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View Structure Prediction Details

Protein: gi|195398721, gi...
Organism: Drosophila virilis
Length: 130 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|195398721, gi....

Description E-value Query
Range
Subject
Range
gi|73958783 - gi|73958783|ref|XP_862159.1| PREDICTED: similar to ARL-6 interacting protein-1 (Aip-1) isoform 8 [Ca...
201.0 [0..1] [130..167]
gi|76640848 - gi|76640848|ref|XP_873532.1| PREDICTED: similar to ribosomal protein S15a [Bos taurus]
195.0 [0..1] [130..118]
gi|50755847 - gi|50755847|ref|XP_425249.1| PREDICTED: similar to Rps15a protein [Gallus gallus]
193.0 [0..1] [130..94]
gi|30109302 - gi|30109302|gb|AAH51205.1| Rps15a protein [Mus musculus]
193.0 [0..1] [130..9]
gi|114594801 - gi|114594801|ref|XP_523306.2| PREDICTED: similar to Rps15a protein [Pan troglodytes]
192.0 [0..1] [130..1]
ENSPTRT00000014415 - null
gi|90074910 - gi|90074910|dbj|BAE87135.1| unnamed protein product [Macaca fascicularis]
ENSCJAT000000436... - null, null
RS15A_RAT - 40S ribosomal protein S15a OS=Rattus norvegicus GN=Rps15a PE=1 SV=2
RPS15A - ribosomal protein S15a
tr|G3IKE2|G3IKE2... - 40S ribosomal protein S15a OS=Cricetulus griseus GN=I79_024343 PE=3 SV=1
gi|73958787, gi|... - gi|73958789|ref|XP_862234.1| PREDICTED: similar to ribosomal protein S15a isoform 10 [Canis familiar...
tr|F7BLU1|F7BLU1... - Ribosomal protein S15a OS=Equus caballus OX=9796 GN=RPS15A PE=3 SV=1
RS15A_MOUSE - 40S ribosomal protein S15a OS=Mus musculus GN=Rps15a PE=1 SV=2
CCDS10571.1_1 - null
RS15A_BOVIN - 40S ribosomal protein S15a OS=Bos taurus GN=RPS15A PE=2 SV=1
ENSMMUG000000055... - null, null, null, null
ENSOCUP000000159... - pep:novel chromosome:oryCun2:6:9242441:9246952:1 gene:ENSOCUG00000000179 transcript:ENSOCUT000000001...
190.0 [0..1] [130..1]
gi|47086525, gi|... - gi|78174360|gb|AAI07524.1| Ribosomal protein S15a [Danio rerio], gi|47086525|ref|NP_997927.1| riboso...
189.0 [0..1] [130..1]
gi|76780132, gi|... - gi|76780132|gb|AAI06350.1| MGC130892 protein [Xenopus laevis], gi|67677960|gb|AAH97585.1| MGC114789 ...
gi|542157969|ref... - PREDICTED: 40S ribosomal protein S15a [Zonotrichia albicollis]
gi|18000277 - gi|18000277|gb|AAL54900.1|AF159546_1 ribosomal protein S15 isoform [Lapemis hardwickii]
gi|118098060, gi... - gi|118098060|ref|XP_425249.2| PREDICTED: similar to ribosomal protein S15 isoform 2 [Gallus gallus],...
gi|156717896, gi... - gi|156717896|ref|NP_001096489.1| hypothetical protein LOC100125111 [Xenopus (Silurana) tropicalis], ...
189.0 [0..1] [130..1]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRMNVLADA LKCINNAEKR GKRQVLLRPC SKVIIKFLTV MMKHGYIGEF EIVDDHRSGK  60
   61 IVVNLTGRLN KCGVISPRFD VPINDIEKWT NNLLPSRQFG YVVLTTSGGI MDHEEARRKH 120
  121 LGGKILGFFF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.69897
Match: 1s1hH
Description: Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle