YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|218753903
Organism:	Mycobacterium tuberculosis GM 1503
Length:	247 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218753903.

Description	E-value	Query Range	Subject Range
gi\|54015188, gi\|... - gi\|54023680\|ref\|YP_117922.1\| putative 1-acylglycerol-3-phosphate O-acyltransferase [Nocardia farcini...	219.0	[0..1]	[246..1]
gi\|41408018, gi\|... - gi\|41408018\|ref\|NP_960854.1\| hypothetical protein MAP1920c [Mycobacterium avium subsp. paratuberculo...	217.0	[0..1]	[247..1]
gi\|25347004, gi\|... - gi\|3080493\|emb\|CAA18690.1\| hypothetical protein MLCB268.24c [Mycobacterium leprae], pir\|\|F87020 prob... gi\|15827414 - gi\|15827414\|ref\|NP_301677.1\| acyltransferase [Mycobacterium leprae TN] gi\|219932998, gi... - gi\|221229891\|ref\|YP_002503307.1\| putative acyltransferase [Mycobacterium leprae Br4923], gi\|21993299...	214.0	[0..1]	[247..1]
gi\|110817658, gi... - gi\|111018128\|ref\|YP_701100.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Rhodococcus jostii RHA...	212.0	[0..1]	[246..1]
gi\|108770662, gi... - gi\|108800243\|ref\|YP_640440.1\| phospholipid/glycerol acyltransferase [Mycobacterium sp. MCS], gi\|1087... gi\|119869371, gi... - gi\|92915568\|ref\|ZP_01284191.1\| Phospholipid/glycerol acyltransferase [Mycobacterium sp. KMS], gi\|924... gi\|92908684, gi\|... - gi\|92908684\|ref\|ZP_01277463.1\| Phospholipid/glycerol acyltransferase [Mycobacterium sp. JLS], gi\|924...	208.0	[0..1]	[247..1]
gi\|84382933, gi\|... - gi\|84496165\|ref\|ZP_00995019.1\| hypothetical protein JNB_01560 [Janibacter sp. HTCC2649], gi\|84382933...	206.0	[0..1]	[245..1]
gi\|89338997, gi\|... - gi\|89338997\|ref\|ZP_01191762.1\| Phospholipid/glycerol acyltransferase [Mycobacterium flavescens PYR-G...	205.0	[0..1]	[247..1]
gi\|119957334, gi... - gi\|90206219\|ref\|ZP_01208855.1\| Phospholipid/glycerol acyltransferase [Mycobacterium vanbaalenii PYR-...	202.0	[0..1]	[247..1]
gi\|116670113, gi... - gi\|66966484\|ref\|ZP_00414043.1\| Phospholipid/glycerol acyltransferase [Arthrobacter sp. FB24], gi\|668...	200.0	[0..1]	[240..1]
gi\|62423415 - gi\|62423415\|ref\|ZP_00378579.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Brevibacteri...	199.0	[0..1]	[243..3]

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Predicted Domain #1

Region A:
Residues: [1-247]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWYYLFKYIF MGPLFTLLGR PKVEGLEYIP SSGPAILASN HLAVADSFYL PLVVRRRIWF  60
   61 LAKSEYFTGT GLKGWINRWF YSVSGQVPID RTNADSAQGA LQTAVVLLGQ GKLLGMYPEG 120
  121 TRSPDGRLYK GKTGLARLAL HTGVPVIPVA MIGTNVVNPP GRKMLRFGRV TVRFGKPMDF 180
  181 SRFEGLAGNH FIERAVTDEV IYELMGLSGQ EYVDIYAASV KDGRNAGGAG ANPNSTDAAR 240
  241 IPETAAG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.221849
Match:	1k30A
Description:	Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits