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View Structure Prediction Details

Protein: gi|166962703, gi...
Organism: Yersinia pestis biovar Orientalis str. MG05-1020
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|166962703, gi....

Description E-value Query
Range		 Subject
Range
GCST_THETN - Aminomethyltransferase OS=Thermoanaerobacter tengcongensis GN=gcvT PE=3 SV=1
GCST_CALS4 - Aminomethyltransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM...
gi|214035115, gi... - gi|254478933|ref|ZP_05092294.1| glycine cleavage system T protein [Carboxydibrachium pacificum DSM 1...
 6.0E-88 [3..320] [38..364]
GCST_THEPX - Aminomethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=gcvT PE=3 SV=1
gi|242256016, gi... - gi|242256016|ref|ZP_04800914.1| glycine cleavage system T protein [Thermoanaerobacter sp. X513], gi|...
 6.0E-83 [3..319] [32..357]
GCST_THEP3 - Aminomethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gcvT PE=3...
gi|241885038, gi... - gi|241902576|ref|ZP_04787309.1| glycine cleavage system T protein [Thermoanaerobacter brockii subsp....
 2.0E-82 [3..319] [32..357]
GCST_HALOH - Aminomethyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=gcvT PE=3 SV...
 3.0E-82 [3..324] [29..356]
GCST_SHEAM - Aminomethyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gcvT PE=3 SV=1
 8.0E-81 [3..321] [30..354]
GCST_SHESM - Aminomethyltransferase OS=Shewanella sp. (strain MR-4) GN=gcvT PE=3 SV=1
 6.0E-80 [3..321] [30..354]
GCST_SHESA - Aminomethyltransferase OS=Shewanella sp. (strain ANA-3) GN=gcvT PE=3 SV=1
 8.0E-80 [3..321] [30..354]
GCST_SHESW - Aminomethyltransferase OS=Shewanella sp. (strain W3-18-1) GN=gcvT PE=3 SV=1
GCST_SHEPC - Aminomethyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gcvT PE=3 SV=1
 1.0E-79 [3..321] [30..354]
SO0779 - glycine cleavage system T protein
GCST_SHEON - Aminomethyltransferase OS=Shewanella oneidensis (strain MR-1) GN=gcvT PE=3 SV=1
 1.0E-79 [3..321] [30..354]
GCST_SHESR - Aminomethyltransferase OS=Shewanella sp. (strain MR-7) GN=gcvT PE=3 SV=1
 1.0E-79 [3..321] [30..354]

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Predicted Domain #1
Region A:
Residues: [1-330] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYHTPFAAQ PPVASSGLPL TLISLDDWAL VTLTGADRVK YLQGQVTADI DALSADQHVL  60
   61 CAHCDAKGKM WSNLRLFYRG EGLAFIERRS LLDNQLSELK KYAVFSKVVI EPQPDAVLIG 120
  121 VAGSQAKTAL AEIFTELPSA EHPVTQMGNS TLLHFSLPAE RFLLVTDTEQ AQQLVEKLAG 180
  181 RAQFNDSKQW LALDIEAGFP IIDAANSAQF IPQATNIQAL NGISFTKGCY TGQEMVARAK 240
  241 YRGANKRALY WLAGNASRVP AAGEDLEWQL GENWRRTGTV LSAIQLNDGT VWVQAVLNND 300
  301 LAADSVLRVR DDALGTLAIQ PLPYSLAEDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.30103
Match: 1vlyA
Description: Crystal structure of Unknown protein from 2D-page (Spot PR51) (b2898) from Escherichia coli k12 at 1.30 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
methyltransferase activity 2.71219746860743 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 2.63021060808724 bayes_pls_golite062009
catalytic activity 1.65079399897053 bayes_pls_golite062009
transferase activity 1.3676947912529 bayes_pls_golite062009
binding 0.132837587724643 bayes_pls_golite062009
aminomethyltransferase activity 0.0576067162699821 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle