YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|110739314, gi...
Organism: Arabidopsis thaliana
Length: 150 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110739314, gi....

Description E-value Query
Range
Subject
Range
gi|30696757 - gi|30696757|ref|NP_849837.1| protease inhibitor/seed storage/lipid transfer protein (LTP) family pro...
119.0 [0..1] [150..1]

Back

Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKTMMIFAA AMTVMALLLV PTIEAQTECV SKLVPCFNDL NTTTTPVKEC CDSIKEAVEK  60
   61 ELTCLCTIYT SPGLLAQFNV TTEKALGLSR RCNVTTDLSA CTAKGAPSPK ASLPPPAPAG 120
  121 NTKKDAGAGN KLAGYGVTTV ILSLISSIFF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.154902
Match: 1be2A
Description: LIPID TRANSFER PROTEIN COMPLEXED WITH PALMITATE, NMR, 10 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle