| Protein: | RIMK_SALPB |
| Organism: | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 |
| Length: | 300 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RIMK_SALPB.
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-68 | [2..300] | [182..510] |
|
|
2.0E-67 | [2..299] | [123..448] |
|
|
5.0E-67 | [2..300] | [67..395] |
|
|
1.0E-66 | [2..300] | [51..379] |
|
Region A: Residues: [1-300] |
1 11 21 31 41 51
| | | | | |
1 MKIAILSRDG TLYSCKRLRE AAMRRGHLVE ILDPLSCYMN INPAASSIHY KGRRLPHFDA 60
61 VIPRIGSAIT FYGTAALRQF ELLGSYPLNE SVAITRARDK LRSLQLLARQ GIDLPITGIA 120
121 HSPDDTSDLI KMVGGAPLVV KLVEGTQGIG VVLAETRQAA ESVIDAFRGL NAHILVQEYI 180
181 AEAKGCDIRC LVVGNEVVAA IERCAKAGDF RSNLHRGGVA SIATITPRER DIAIKAAQTL 240
241 GLDVAGVDIL RAARGPLVME VNASPGLEGI EKTTGVDIAG RMIQWIERHA TPEFCLKIGG 300
301
|
| Detection Method: |  |
| Confidence: | 60.09691 |
| Match: | 1bxrA |
| Description: | Carbamoyl phosphate synthetase, large subunit connection domain; Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain; Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains; Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity | 2.76972866130423 | bayes_pls_golite062009 |
| catalytic activity | 2.5009559386228 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.318415105717148 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.239594107637156 | bayes_pls_golite062009 |
