YRC Public Data Repository - Protein Structure Prediction

Protein:	BOLA1_PONAB
Organism:	Pongo abelii
Length:	137 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BOLA1_PONAB.

Description	E-value	Query Range	Subject Range
gi\|73981250, gi\|... - gi\|73981250\|ref\|XP_849759.1\| PREDICTED: similar to bolA-like 1 isoform 3 [Canis familiaris], gi\|5709...	184.0	[0..1]	[137..1]
BOLA1 - bolA homolog 1 (E. coli)	184.0	[0..1]	[137..1]
gi\|55588110, gi\|... - gi\|55588110\|ref\|XP_513766.1\| PREDICTED: bolA-like 1 isoform 3 [Pan troglodytes], gi\|114559186\|ref\|XP... sp\|Q9Y3E2-1\|BOLA... - BolA-like protein 1 OS=Homo sapiens GN=BOLA1 PE=1 SV=1 VAR_033630, BolA-like protein 1 OS=Homo sapie...	183.0	[0..1]	[137..1]
gi\|109015979, gi... - gi\|109015979\|ref\|XP_001096955.1\| PREDICTED: similar to bolA-like 1 isoform 2 [Macaca mulatta], gi\|10...	181.0	[0..1]	[137..1]
gi\|62643916, gi\|... - gi\|62643916\|ref\|XP_345254.2\| PREDICTED: similar to bolA-like 1 [Rattus norvegicus], gi\|149030608\|gb\|...	173.0	[0..1]	[136..1]
BOLA1_BOVIN - BolA-like protein 1 OS=Bos taurus GN=BOLA1 PE=2 SV=1	173.0	[0..1]	[134..1]
BOLA1_MOUSE - BolA-like protein 1 OS=Mus musculus GN=Bola1 PE=1 SV=1	168.0	[0..1]	[136..1]
gi\|68393740 - gi\|68393740\|ref\|XP_701456.1\| PREDICTED: hypothetical protein XP_696364 [Danio rerio]	158.0	[0..1]	[133..1]
gi\|76794909, gi\|... - gi\|76794909\|ref\|ZP_00777362.1\| BolA-like protein [Pseudoalteromonas atlantica T6c], gi\|76589816\|gb\|E...	154.0	[0..30]	[131..1]
gi\|83635724, gi\|... - gi\|83647681\|ref\|YP_436116.1\| stress-induced morphogen [Hahella chejuensis KCTC 2396], gi\|83635724\|gb...	151.0	[0..30]	[134..1]

Back

Predicted Domain #1

Region A:
Residues: [1-137]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSGRLVPGL VSMAGRVCLC QGSAGSGAVG PVEAAIRTKL EQALSPEVLE LRNESGGHAV  60
   61 PPGSETHFRV AVVSSRFEGL SPLQRHRLIH AALAEELAGP VHALAIQART PAQWGENSQL 120
  121 DTSPPCLGGN KKTLGTP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.69897
Match:	1v60A
Description:	Solution structure of BolA1 protein from Mus musculus
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits