YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30749483, gi\|...
Organism:	Escherichia coli
Length:	172 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30749483, gi|....

Description	E-value	Query Range	Subject Range
gi\|94426125, gi\|... - gi\|94501725\|ref\|ZP_01308239.1\| Molybdopterin biosynthesis enzyme [Oceanobacter sp. RED65], gi\|944261...	175.0	[0..3]	[171..4]
gi\|75855798, gi\|... - gi\|75855798\|ref\|ZP_00763439.1\| COG0521: Molybdopterin biosynthesis enzymes [Vibrio sp. Ex25], gi\|116...	174.0	[0..3]	[168..3]
gi\|91227351, gi\|... - gi\|91227351\|ref\|ZP_01261740.1\| molybdenum cofactor biosynthesis protein B [Vibrio alginolyticus 12G0...	174.0	[0..3]	[168..3]
gi\|83635624, gi\|... - gi\|83647581\|ref\|YP_436016.1\| molybdopterin biosynthesis protein [Hahella chejuensis KCTC 2396], gi\|8...	174.0	[0..3]	[170..4]
gi\|88773538, gi\|... - gi\|88795119\|ref\|ZP_01110820.1\| molybdenum cofactor biosynthesis protein B [Alteromonas macleodii 'De...	173.0	[0..3]	[171..19]
gi\|27362556, gi\|... - gi\|27366355\|ref\|NP_761883.1\| molybdenum cofactor biosynthesis protein B [Vibrio vulnificus CMCP6], g... gi\|37198126, gi\|... - gi\|37679383\|ref\|NP_933992.1\| molybdenum cofactor biosynthesis protein B [Vibrio vulnificus YJ016], g...	173.0	[0..3]	[168..3]
gi\|91721013, gi\|... - gi\|91770049\|ref\|ZP_01271879.1\| Molybdopterin binding domain [Psychrobacter sp. PRwf-1], gi\|91721013\|...	173.0	[0..3]	[170..2]
gi\|28807088 - gi\|28807088\|dbj\|BAC60358.1\| molybdenum cofactor biosynthesis protein B [Vibrio parahaemolyticus RIMD... gi\|28898869, gi\|... - gi\|28898869\|ref\|NP_798474.1\| molybdenum cofactor biosynthesis protein B [Vibrio parahaemolyticus RIM...	173.0	[0..3]	[168..3]
gi\|114739584, gi... - gi\|114799410\|ref\|YP_759787.1\| molybdenum cofactor biosynthesis protein B [Hyphomonas neptunium ATCC ...	173.0	[0..7]	[172..9]
gi\|69133385, gi\|... - gi\|99078042\|ref\|YP_611300.1\| molybdenum cofactor biosynthesis protein B [Silicibacter sp. TM1040], g...	172.0	[0..8]	[171..10]

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Predicted Domain #1

Region A:
Residues: [1-172]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 XSQVSTEFIP TRIAILTVSN RRGEEDDTSG HYLRDSAQEA GHHVVDKAIV KENRYAIRAQ  60
   61 VSAWIASDDV QVVLITGGTG LTEGDQAPEA LLPLFDREVE GFGEVFRXLS FEEIGTSTLQ 120
  121 SRAVAGVANK TLILAXPGST KACRTAWENI IAPQLDARTR PCNFHPHLKK GS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.30103
Match:	1r2kB
Description:	Crystal structure of MoaB from Escherichia coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.9303555688427	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: