YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30749256
Organism:	Mus musculus
Length:	103 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30749256.

Description	E-value	Query Range	Subject Range
gi\|18146654 - gi\|18146654\|dbj\|BAB82424.1\| protein tyrosine kinase [Ephydatia fluviatilis]	127.0	[0..3]	[101..119]
gi\|30176005, gi\|... - gi\|31216963\|ref\|XP_316335.1\| ENSANGP00000005994 [Anopheles gambiae str. PEST], gi\|30176005\|gb\|EAA107... AGAP006270-PA - fyn-related kinase\|protein_coding\|2L:28931170:29014318:-1\|gene:AGAP006270	126.0	[0..3]	[103..122]
FBpp0307254 - type=protein; loc=2R:join(1869923..1870213,1874077..1874171,1896568..1896689,1896776..1896860,189692... gi\|194127506, gi... - gi\|195353784\|ref\|XP_002043383.1\| GM16530 [Drosophila sechellia], gi\|194127506\|gb\|EDW49549.1\| GM16530... gi\|194864146, gi... - gi\|194864146\|ref\|XP_001970793.1\| GG23190 [Drosophila erecta], gi\|190662660\|gb\|EDV59852.1\| GG23190 [D... gi\|220955782 - gi\|220955782\|gb\|ACL90434.1\| Src42A-PA [synthetic construct] gi\|195580872, gi... - gi\|195580872\|ref\|XP_002080258.1\| GD10390 [Drosophila simulans], gi\|194192267\|gb\|EDX05843.1\| GD10390 ...	125.0	[0..3]	[103..128]
gi\|112419733 - gi\|112419733\|dbj\|BAF02920.1\| protein tyrosine kinase src [Monosiga ovata]	125.0	[0..3]	[103..124]
gi\|91086687 - gi\|91086687\|ref\|XP_969129.1\| PREDICTED: similar to AGAP006270-PA [Tribolium castaneum]	125.0	[0..3]	[103..121]
gi\|148726500, gi... - gi\|47086483\|ref\|NP_997946.1\| Yes-related kinase [Danio rerio], gi\|27372075\|gb\|AAN87886.1\| Yes-relaye...	124.0	[0..3]	[102..138]
YES_XENLA - Tyrosine-protein kinase Yes OS=Xenopus laevis GN=yes1 PE=2 SV=3	124.0	[0..3]	[102..150]

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Predicted Domain #1

Region A:
Residues: [1-103]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLPYYHGCL TKRECEALLL KGGVDGNFLI RDSESVPGAL CLCVSFKKLV YSYRIFREKH  60
   61 GYYRIETDAH TPRTIFPNLQ ELVSKYGKPG QGLVVHLSNP IMR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.0
Match:	1i3zA
Description:	Ews/fli1 activated transcript 2, Eat2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	0.434026084000615	bayes_pls_golite062009
protein binding	0.31534665043077	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: