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View Structure Prediction Details

Protein: RVE6_ARATH
Organism: Arabidopsis thaliana
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RVE6_ARATH.

Description E-value Query
Range
Subject
Range
gi|62241826, gi|... - gi|62241826|emb|CAI77451.1| myb transcription factor LHY-CCA1-like2 [Arabidopsis thaliana], gi|30696...
243.0 [0..1] [331..1]

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Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK  60
   61 KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF IGSKTVIQIR SHAQKYFLKV 120
  121 QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.045757
Match: 2v1dB
Description: No description for 2v1dB was found.

Predicted Domain #2
Region A:
Residues: [179-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LMTSPTTAAA APWTNNAQTI SFTPLPKAGA GANNNCSSSS ENTPRPRSNR DARDHGNVGH  60
   61 SLRVLPDFAQ VYGFIGSVFD PYASNHLQKL KKMDPIDVET VLLLMRNLSI NLSSPDFEDH 120
  121 RRLLSSYDIG SETATDHGGV NKTLNKDPPE IST

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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