YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: RSZ21_ARATH
Organism: Arabidopsis thaliana
Length: 187 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RSZ21_ARATH.

Description E-value Query
Range
Subject
Range
gi|49657746, gi|... - gi|50426951|ref|XP_462076.1| hypothetical protein DEHA0G13255g [Debaryomyces hansenii CBS767], gi|49...
PABP_DEBHA - Polyadenylate-binding protein, cytoplasmic and nuclear - Debaryomyces hansenii (Yeast) (Torulaspora ...
125.0 [0..3] [180..336]

Back

Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRVYVGNLD PRVTERELED EFKAFGVLRN VWVARRPPGY AFLEFDDERD ALDAISALDR  60
   61 KNGWRVELSH KDKGGRGGGG G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.154902
Match: 2i2yA
Description: No description for 2i2yA was found.

Predicted Domain #2
Region A:
Residues: [82-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRGGIEDSKC YECGELGHFA RECRRGRGSV RRRSPSPRRR RSPDYGYARR SISPRGRRSP  60
   61 PRRRSVTPPR RGRSYSRSPP YRGSRRDSPR RRDSPYGRRS PYANGV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.97
Match: 2cqfA
Description: Solution Structure of the Zinc-finger domain in LIN-28
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle