YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|27573675, gi\|...
Organism:	Haemophilus influenzae
Length:	146 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|27573675, gi|....

Description	E-value	Query Range	Subject Range
Y074_HAEIN - Uncharacterized protein HI_0074 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd... Y074_HAEIN - Uncharacterized protein HI_0074 OS=Haemophilus influenzae GN=HI_0074 PE=1 SV=1	176.0	[0..3]	[146..3]
gi\|68248625, gi\|... - gi\|68248625\|ref\|YP_247737.1\| hypothetical protein NTHI0087 [Haemophilus influenzae 86-028NP], gi\|680...	176.0	[0..3]	[146..3]
gi\|53732613 - gi\|53732613\|ref\|ZP_00154804.2\| hypothetical protein Hflu103001294 [Haemophilus influenzae R2846]	171.0	[0..3]	[146..3]
gi\|46133694 - gi\|46133694\|ref\|ZP_00157581.2\| hypothetical protein Hflu203001262 [Haemophilus influenzae R2866]	169.0	[0..3]	[143..3]
gi\|58427673 - gi\|58427673\|gb\|AAW76710.1\| hypothetical protein XOO3456 [Xanthomonas oryzae pv. oryzae KACC10331] gi\|84624918, gi\|... - gi\|84624918\|ref\|YP_452290.1\| nucleotidyltransferase [Xanthomonas oryzae pv. oryzae MAFF 311018], gi\|...	157.0	[0..4]	[143..4]
gi\|148569719, gi... - gi\|148657609\|ref\|YP_001277814.1\| HI0074 family nucleotidyltransferase substrate binding protein [Ros...	153.0	[0..6]	[143..3]
gi\|222526554, gi... - gi\|222526554\|ref\|YP_002571025.1\| nucleotidyltransferase substrate binding protein, HI0074 family [Ch... gi\|53794754 - ref\|ZP_00355879.1\| hypothetical protein Chlo02004698 [Chloroflexus aurantiacus] gi\|163669909, gi... - gi\|76260157\|ref\|ZP_00767797.1\| Nucleotidyltransferase substrate binding protein, HI0074 [Chloroflexu...	152.0	[0..6]	[144..3]
gi\|56381088, gi\|... - gi\|56421246\|ref\|YP_148564.1\| hypothetical protein GK2711 [Geobacillus kaustophilus HTA426], gi\|56381...	150.0	[0..8]	[142..114]
gi\|71541717, gi\|... - gi\|71541717\|ref\|ZP_00663439.1\| Nucleotidyltransferase substrate binding protein, HI0074 [Syntrophomo...	146.0	[0..5]	[143..2]
gi\|150840226, gi... - gi\|75428876\|ref\|ZP_00731944.1\| conserved hypothetical protein HI0074 [Actinobacillus succinogenes 13...	144.0	[0..6]	[145..7]

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Predicted Domain #1

Region A:
Residues: [1-146]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 XXTDKLNLNV LDAAFYSLEQ TVVQISDRNW FDXQPSIVQD TLIAGAIQKF EFVYELSLKX  60
   61 XKRQLQQDAI NTDDIGAYGF KDILREALRF GLIGDXSKWV AYRDXRNITS HTYDQEKAXA 120
  121 VYAQIDDFLI ESSFLLEQLR QRNQYD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	44.69897
Match:	1jogA
Description:	Hypotetical protein HI0074
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.372436499192166	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: