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View Structure Prediction Details

Protein: ERL2_ARATH
Organism: Arabidopsis thaliana
Length: 967 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for ERL2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRIETMKGL FFCLGMVVFM LLGSVSPMNN EGKALMAIKA SFSNVANMLL DWDDVHNHDF  60
   61 CSWRGVFCDN VSLNVVSLNL SNLNLGGEIS SALGDLMNLQ SIDLQGNKLG GQIPDEIGNC 120
  121 VSLAYVDFST NLLFGDIPFS ISKLKQLEFL NLKNNQLTGP IPATLTQIPN LKTLDLARNQ 180
  181 LTGEIPRLLY WNEVLQYLGL RGNMLTGTLS PDMCQLTGLW YFDVRGNNLT GTIPESIGNC 240
  241 TSFEILDVSY NQITGVIPYN IGFLQVATLS LQGNKLTGRI PEVIGLMQAL AVLDLSDNEL 300
  301 TGPIPPILGN LSFTGKLYLH GNKLTGQIPP ELGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 1ogqA
Description: Polygalacturonase inhibiting protein PGIP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [335-448]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLSYLQLN DNELVGKIPP ELGKLEQLFE LNLANNNLVG LIPSNISSCA ALNQFNVHGN  60
   61 FLSGAVPLEF RNLGSLTYLN LSSNSFKGKI PAELGHIINL DTLDLSGNNF SGSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 2z66A
Description: No description for 2z66A was found.

Predicted Domain #3
Region A:
Residues: [449-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLTLGDLEHL LILNLSRNHL NGTLPAEFGN LRSIQIIDVS FNFLAGVIPT ELGQLQNINS  60
   61 LILNNNKIHG KIPDQLTNCF SLANLNISFN NLSGIIPPMK NFTRFSPASF FGNPFLCGNW 120
  121 VGSICGPSLP KSQVFTRVAV ICMVLGFITL ICMIFIAVYK SKQQKPVLKG SSKQP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [624-967]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGSTKLVILH MDMAIHTFDD IMRVTENLDE KYIIGYGASS TVYKCTSKTS RPIAIKRIYN  60
   61 QYPSNFREFE TELETIGSIR HRNIVSLHGY ALSPFGNLLF YDYMENGSLW DLLHGPGKKV 120
  121 KLDWETRLKI AVGAAQGLAY LHHDCTPRII HRDIKSSNIL LDGNFEARLS DFGIAKSIPA 180
  181 TKTYASTYVL GTIGYIDPEY ARTSRLNEKS DIYSFGIVLL ELLTGKKAVD NEANLHQMIL 240
  241 SKADDNTVME AVDAEVSVTC MDSGHIKKTF QLALLCTKRN PLERPTMQEV SRVLLSLVPS 300
  301 PPPKKLPSPA KVQEGEERRE SHSSDTTTPQ WFVQFREDIS KSSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.39794
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle