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View Structure Prediction Details

Protein: gi|18403812, gi|...
Organism: Arabidopsis thaliana
Length: 239 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18403812, gi|....

Description E-value Query
Range
Subject
Range
gi|24899687 - gi|24899687|gb|AAN65058.1| Unknown protein [Arabidopsis thaliana]
163.0 [0..1] [239..1]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGHQCTENP PDLDPTSGSG HVEKLGNLDT YVCGSTHSKL AVLLVPHVFG YETPNLRKLA  60
   61 DKVAEAGFYA VVPDFFHGDP YNPENQDRPF PIWMKDHELE KGFEESKPIV EALKNKGITS 120
  121 IGAAGFCWGA KVAVELAKEK LVDATVLLHP ARVTVDDIKE VNLPIAVLGA EIDQVSPPEL 180
  181 VRQFEDILAS KPQVKSFVKI FPRCKHGWTV RYNENDPSEV EAAMEAHKDM LAWLIDYLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.522879
Match: 1zi6A
Description: Crystal Structure Analysis of the dienelactone hydrolase (C123S) mutant- 1.7 A
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle