| Protein: | gi|77554087, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 390 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|77554087, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
243.0 | [0..70] | [389..1580] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MGSSGADAPT KTSKASAPQE QQPPASSSTA TPAVYPDWAN FQGYPPIPPH GFFPSPVASS 60
61 PQGHPYMWGA QPMIPPYGTP PPPYVMYPPG VYAHPSMPPG AHPFTPYAMA SPNGNADPTG 120
121 TTTTAAAAAA GETDGKSSEG K
|
| Detection Method: |  |
| Confidence: | 57.229148 |
| Match: | PF07777.2 |
| Description: | No description for PF07777.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [142-279] |
1 11 21 31 41 51
| | | | | |
1 EKSPIKRSKG SLGSLNMITG KNSTEHGKTS GASANGAISQ SGESGSESSS EGSEANSQND 60
61 SHHKESGQEQ DGEVRSSQNG VSRSPSQAKL NQTMAIMPMT SSGPVPAPTT NLNIGMDYWA 120
121 NTASSTPAIH GKATPTAA
|
| Detection Method: | |
| Confidence: | 1.1 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [280-390] |
1 11 21 31 41 51
| | | | | |
1 PGSMVPGEQW VQDERELKRQ RRKQSNRESA RRSRLRKQAE CEELAQRAEV LKQENTSLRD 60
61 EVNRIRKEYD ELLSKNSSLK EKLEDKQHKT DEAGVDNKLQ HSGDDSQKKG N
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
