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View Structure Prediction Details

Protein: RLA3_MAIZE
Organism: Zea mays
Length: 120 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLA3_MAIZE.

Description E-value Query
Range
Subject
Range
gi|38503544 - gi|38503544|gb|AAR22559.1| 60S acidic ribosomal protein P3 [Lactuca saligna]
130.0 [0..1] [69..9]
gi|38503536 - gi|38503536|gb|AAR22555.1| 60S acidic ribosomal protein P3 [Lactuca sativa]
120.0 [0..1] [69..1]
gi|38503542 - gi|38503542|gb|AAR22558.1| 60S acidic ribosomal protein P3 [Lactuca serriola]
120.0 [0..3] [69..1]
RLA32_ARATH - 60S acidic ribosomal protein P3-2 OS=Arabidopsis thaliana GN=RPP3B PE=2 SV=1
113.0 [0..1] [69..1]
gi|125525035 - gi|125525035|gb|EAY73149.1| hypothetical protein OsI_01022 [Oryza sativa Indica Group]
gi|56783875, gi|... - gi|56783875|dbj|BAD81287.1| putative acidic ribosomal protein P3a [Oryza sativa Japonica Group], gi|...
112.0 [0..1] [120..1]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVYTFVCRN NGGEWTAKQH SGEIEASAAT PYELQRRLVA AASAADSRYG VQSSFSMVTP  60
   61 SSAVFQVIVG AVGGGAMMVS GGGGGGAAAS GGAAAEAPKE EKKEEEKEES DDDMGFSLFD 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 8.244125
Match: PF00428.10
Description: No description for PF00428.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle