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View Structure Prediction Details

Protein: gi|2978511
Organism: Homo sapiens
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2978511.

Description E-value Query
Range
Subject
Range
gi|109114667 - gi|109114667|ref|XP_001104631.1| PREDICTED: similar to septin 4 isoform 3 [Macaca mulatta]
0.0 [1..416] [139..576]
gi|1809265 - gi|1809265|gb|AAB93436.1| H5 [Homo sapiens]
0.0 [33..417] [1..385]
SEPT4_MOUSE - Septin-4 OS=Mus musculus GN=Sept4 PE=1 SV=1
0.0 [1..416] [39..476]
SEPT4_PONAB - Septin-4 OS=Pongo abelii GN=SEPT4 PE=2 SV=1
SEPT4_PONPY - Septin-4 - Pongo pygmaeus (Orangutan)
0.0 [1..416] [39..476]
gi|114669611 - gi|114669611|ref|XP_511911.2| PREDICTED: hypothetical protein [Pan troglodytes]
0.0 [1..416] [32..469]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPFPGDGGRG RLCRPPPRAP RAPATPRLWL GCGSGACPDC DAATAWGQFA QSGGWLGRPR  60
   61 GSTIPRDIDK QYVG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.30103
Match: 1pujA
Description: Probable GTPase YlqF
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [75-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FATLPNQVHR KSVKKGFDFT LMVAGESGLG KSTLVHSLFL TDLYKDRKLL SAEERISQTV  60
   61 EILKHTVDIE EKGVKLKLTI VDTPGFGDAV NNTECWKPIT DYVDQQFEQY FRDESGLNRK 120
  121 NIQDNRVHCC LYFISPFGHG LRPVDVGFMK ALHEKVNIVP LIAKADCLVP SEIRKLKERI 180
  181 REEIDKFGIH VYQFPECDSD EDEDFKQQDR ELKESAPFAV IGSNTVVEAK GQRVRGRLYP 240
  241 WGIVEVENQA HCDFVKLRNM LIRTHMHDLK DVTCDVHYEN YRAHCIQQMT SKLTQDSRME 300
  301 SPIPILPLPT PDAETEKLIR MKDEELRRMQ EMLQRMKQQM QDQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.69897
Match: 2qagA
Description: No description for 2qagA was found.

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