YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MGDG2_ARATH
Organism: Arabidopsis thaliana
Length: 468 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MGDG2_ARATH.

Description E-value Query
Range
Subject
Range
MGDG3_ARATH - Monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Arabidopsis thaliana GN=MGD3 PE=1 SV=2
233.0 [0..7] [454..9]

Back

Predicted Domain #1
Region A:
Residues: [1-468]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTVMALAE KVLERVYGTS KSAVSVTSGD GEKTHRHTHH HIHRIKSYDD IDEDESSLEL  60
   61 IQIGAERTKN VLILMSDTGG GHRASAEAIR DAFKIEFGDK YRVIVKDVWK EYTGWPLNDM 120
  121 ERSYKFMVKH VQLWKVAFHS TSPKWIHSCY LAAIAAYYAK EVEAGLMEYK PEIIISVHPL 180
  181 MQHIPLWVLK WQELQKRVLF VTVITDLNTC HPTWFHPGVN RCYCPSQEVA KRALFDGLDE 240
  241 SQVRVFGLPV RPSFARAVLV KDDLRKELEM DQDLRAVLLM GGGEGMGPVK ETAKALEEFL 300
  301 YDKENRKPIG QMVVICGRNK KLASALEAID WKIPVKVRGF ETQMEKWMGA CDCIITKAGP 360
  361 GTIAESLIRS LPIILNDYIP GQEKGNVPYV VENGAGVFTR SPKETARIVG EWFSTKTDEL 420
  421 EQTSDNARKL AQPEAVFDIV KDIDELSEQR GPLASVSYNL TSSFASLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.30103
Match: 1f0kA
Description: Peptidoglycan biosynthesys glycosyltransferase MurG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring hexosyl groups 3.11317874771445 bayes_pls_golite062009
catalytic activity 2.65148466065976 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 2.62403914335522 bayes_pls_golite062009
glucosyltransferase activity 1.64464663763778 bayes_pls_golite062009
UDP-N-acetylglucosamine 2-epimerase activity 1.55280519670033 bayes_pls_golite062009
UDP-glycosyltransferase activity 1.46727614814358 bayes_pls_golite062009
transferase activity 1.40378926992879 bayes_pls_golite062009
UDP-glucosyltransferase activity 1.36139844141047 bayes_pls_golite062009
glycogen phosphorylase activity 0.497562421646423 bayes_pls_golite062009
alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity 0.324296761919319 bayes_pls_golite062009
phosphorylase activity 0.296436712681472 bayes_pls_golite062009
binding 0.096184466041049 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle