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View Structure Prediction Details

Protein: NPRT2_ARATH
Organism: Arabidopsis thaliana
Length: 557 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPRT2_ARATH.

Description E-value Query
Range
Subject
Range
gi|3242705, gi|7... - pir||T01131 hypothetical protein At2g23420 [imported] - Arabidopsis thaliana, gi|3242705|gb|AAC23757...
621.0 [0..1] [557..1]

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Predicted Domain #1
Region A:
Residues: [1-557]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF  60
   61 GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA FCDYLRGLDC SDVEVYAIPE 120
  121 GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR 180
  181 RAQGPDGAIS ASKYCYLGGF DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR 240
  241 SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT 300
  301 YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK 360
  361 MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA ALGCVFKLVE INNQPRIKLS 420
  421 EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ 480
  481 RVEELLKCYW RGSADEAREV LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY 540
  541 DFIHFLWLNE APVGELQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 136.0
Match: 2f7fA
Description: Crystal structure of Enterococcus faecalis putative nicotinate phosphoribosyltransferase, NEW YORK STRUCTURAL GENOMICS CONSORTIUM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nicotinate phosphoribosyltransferase activity 6.27751846600304 bayes_pls_golite062009
nicotinate-nucleotide diphosphorylase (carboxylating) activity 3.12788282156037 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 1.28938930256604 bayes_pls_golite062009
binding 0.653855264785782 bayes_pls_golite062009
catalytic activity 0.60409960326459 bayes_pls_golite062009
protein binding 0.317577842532028 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle