| Protein: | VAP13_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 239 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAP13_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..1] | [239..1] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MTTGDLVNIH PTELKFPFEL KKQSSCSMQL TNKTTTQCVA FKVKTTNPRK YCVRPNTGVV 60
61 LPGDSCNVTV TMQAQKEAPL DMQCKDKFLV QTVVVSDGTT SKEVLAEMFN KEAGRVIEDF 120
121 KLRVVYIPAN PPSPVPEGSE EGNS
|
| Detection Method: |  |
| Confidence: | 32.39794 |
| Match: | 2criA |
| Description: | Solution structure of the MSP domain of mouse VAMP-associated proteinA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [145-239] |
1 11 21 31 41 51
| | | | | |
1 PMASLNDIAS QSASLFDDVS RTFEETSEKS SEAWSMISKL TEEKTSATQQ SQKLRLELEM 60
61 LRKETSKKQS GGHSLLLMLL VGLLGCVIGY LLNRI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
